RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 LINC00615Q96LM1 132 aaPredicted RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 SDF2Q99470 211 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 RTBDNQ9BSG5 229 aaPredicted RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 ABHD6Q9BV23 337 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ZNF586Q9NXT0 402 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 TAS2R4Q9NYW5 299 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 OR6C3Q9NZP0 311 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 TBC1D29Q9UFV1 150 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 LAMTOR2Q9Y2Q5 125 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 MRPS16Q9Y3D3 137 aaKnown RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 PLXNA2O75051 1894 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 KNTC1P50748 2209 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 STAB1Q9NY15 2570 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 TRAV9-1A0A075B6T8 112 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 DUXBA0A1W2PPF3 345 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 TMEM202A6NGA9 273 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 CRYM-AS1A6NIL9 109 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 USP17L23D6RBM5 183 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 HSPB6O14558 160 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 LDB3O75112 727 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 VENTXO95231 258 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 HLA-HP01893 362 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ISG15P05161 165 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 CTXN2P0C2S0 81 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 CD99P14209 185 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 HIST1H1DP16402 221 aaKnown RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 TCN2P20062 427 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 TUBG1P23258 451 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ATP6V0CP27449 155 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 PSMB5P28074 263 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 CDKN2AP42771 156 aaKnown RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 GABRA2P47869 451 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 EFNA3P52797 238 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 EMP2P54851 167 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 LCN6P62502 163 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 EWSR1Q01844 656 aaKnown RBP eCLIP4.64□□□□□ -1.67
CLK1-202ENST00000409403 FHL1Q13642 323 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ZNF74Q16587 644 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 PRSS8Q16651 343 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 HYAL4Q2M3T9 481 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 BSXQ3C1V8 233 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 CLLU1OSQ5K130 101 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 TPTE2P1Q5T6R2 138 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 C1orf185Q5T7R7 199 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 SLC8B1Q6J4K2 584 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 C16orf82Q7Z2V1 217 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 LGI3Q8N145 548 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 LYG1Q8N1E2 194 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 GVQW1Q8N7I0 195 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 LRTM2Q8N967 370 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ZFP62Q8NB50 900 aaPredicted RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 OR51G1Q8NGK1 321 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 OR1L6Q8NGR2 347 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 OTOSQ8NHW6 89 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 KCNG3Q8TAE7 436 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 TOMM40LQ969M1 308 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ALG14Q96F25 216 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 PGAM5Q96HS1 289 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 SF3B5Q9BWJ5 86 aaKnown RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 RAB11FIP5Q9BXF6 653 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 SH3BGRL3Q9H299 93 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 KCNK15Q9H427 330 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ZNF430Q9H8G1 570 aaPredicted RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 PLEKHF2Q9H8W4 249 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 WFDC1Q9HC57 220 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 EHFQ9NZC4 300 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 MSRB1Q9NZV6 116 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 MRPL27Q9P0M9 148 aaKnown RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 TAC3Q9UHF0 121 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 CES1P1Q9UKY3 287 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 JMJD1CQ15652 2540 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 LOC105371242A0A075B767 164 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 IGHV1-69-2A0A0G2JMI3 117 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 A0A1B0GV72 72 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 SYNDIG1LA6NDD5 238 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 GJE1A6NN92 205 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 PRR32B1ATL7 298 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 TMEM250H0YL14 139 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 KBTBD11O94819 623 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 CDS2O95674 445 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 CLDN1O95832 211 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 HPNP05981 417 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 PNMTP11086 282 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 CTSEP14091 401 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 PTNP21246 168 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 CDAP32320 146 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 ACAA2P42765 397 aaKnown RBP4.63□□□□□ -1.67
CLK1-202ENST00000409403 RAB28P51157 221 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 UCNP55089 124 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 CSNK2A1P68400 391 aaPredicted RBP4.63□□□□□ -1.67
CLK1-202ENST00000409403 RHOGP84095 191 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 ADIRFQ15847 76 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 MPV17LQ2QL34 196 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 SMIM21Q3B7S5 101 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 ZNF658BQ4V348 819 aaPredicted RBP4.63□□□□□ -1.67
CLK1-202ENST00000409403 ASPHD1Q5U4P2 390 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 C22orf39Q6P5X5 142 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 ZNF880Q6PDB4 577 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 DNM1P34Q6PK57 102 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 Q6ZN92 141 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms