RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ZNF626Q68DY1 528 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 DYNAPQ8N1N2 210 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 OR11H6Q8NGC7 330 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 TOMM40LQ969M1 308 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 GPHA2Q96T91 129 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 MMP28Q9H239 520 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 A0A0U1RQK1 487 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 RGS11O94810 467 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 PPYP01298 95 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 IGLV1-47P01700 117 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 CD74P04233 296 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 IFNA6P05013 189 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 CTXN2P0C2S0 81 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 ZNF735P0CB33 412 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 SPNP16150 400 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 EPHA1P21709 976 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 PRRX1P54821 245 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 LGALS4P56470 323 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 LINC00205P59089 165 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 RPL39P5Q59GN2 51 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 MZT2BQ6NZ67 158 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 SLC25A48Q6ZT89 311 aaKnown RBP11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 OR51S1Q8NGJ8 323 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 SECTM1Q8WVN6 248 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 MS4A7Q9GZW8 240 aaPredicted RBP11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 OR2D2Q9H210 308 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 IFI27L2Q9H2X8 130 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 HRASLSQ9HDD0 168 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 NUP50Q9UKX7 468 aa11.44□□□□□ -0.58
CHRNA1-204ENST00000409323 SAA2-SAA4A0A096LPE2 208 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 OR5H14A6NHG9 310 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 BUB1B-PAK6H3BSN5 160 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 FSHBP01225 129 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 SAA2P0DJI9 122 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 BTCP35070 178 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 AP3S2P59780 193 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 BAMBIQ13145 260 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 SSX2Q16385 188 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 ZNF660Q6AZW8 331 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 ODF3L1Q8IXM7 274 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 DRAXINQ8NBI3 349 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 C5orf30Q96GV9 206 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 AJUBAQ96IF1 538 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 MARVELD1Q9BSK0 173 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 BEX2Q9BXY8 128 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 FXYD6Q9H0Q3 95 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 TAS2R8Q9NYW2 309 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 OR2W1Q9Y3N9 320 aa11.43□□□□□ -0.58
CHRNA1-204ENST00000409323 HSD17B6O14756 317 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 TUSC2O75896 110 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 HERV-K104P61576 105 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 TMEM30BQ3MIR4 351 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 Q3ZCU0 254 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 ACTBL2Q562R1 376 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 VAX1Q5SQQ9 334 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 OR6F1Q8NGZ6 308 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 ZNF596Q8TC21 504 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 CHAC2Q8WUX2 184 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 TEP1Q99973 2627 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 AGMATQ9BSE5 352 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 FN1P02751 2386 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 MTORP42345 2549 aa11.42□□□□□ -0.58
CHRNA1-204ENST00000409323 NAP1L6A6NFF2 107 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 TNFSF12O43508 249 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 DIRAS3O95661 229 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 PI3P19957 117 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 HTR1DP28221 377 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 CCR6P51684 374 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 LUMP51884 338 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 DHRS11Q6UWP2 260 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 BEND2Q8NDZ0 799 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 GIMAP1Q8WWP7 306 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 EDARADDQ8WWZ3 215 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 SLC5A7Q9GZV3 580 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 CCL28Q9NRJ3 127 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 IGHV3-72A0A0B4J1Y9 119 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 DISC1C4P0D8 188 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 HNF1AP20823 631 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 CD24P25063 80 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 GPR12P47775 334 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 RAB13P51153 203 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 BCAP31P51572 246 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 DEFB112Q30KQ8 113 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 AADACL3Q5VUY0 350 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 GLDNQ6ZMI3 551 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 MRGPRFQ96AM1 343 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 RPEQ96AT9 228 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 TNFRSF19Q9NS68 423 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 COPZ2Q9P299 210 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 DPM3Q9P2X0 92 aa11.41□□□□□ -0.58
CHRNA1-204ENST00000409323 ZFHX3Q15911 3703 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 CENPXA8MT69 81 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 PROP1O75360 226 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 PGAM2P15259 253 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 SRD5A1P18405 259 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 TBPP20226 339 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 RAB7AP51149 207 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 RAG2P55895 527 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 MEF2DQ14814 521 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 MIDNQ504T8 468 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms