RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 AURKAIP1Q9NWT8 199 aaPredicted RBP7.16□□□□□ -1.26
SNORD88A-201ENST00000408314 NDUFB11Q9NX14 153 aa7.16□□□□□ -1.26
SNORD88A-201ENST00000408314 RAB22AQ9UL26 194 aa7.16□□□□□ -1.26
SNORD88A-201ENST00000408314 AK6Q9Y3D8 172 aaKnown RBP7.16□□□□□ -1.26
SNORD88A-201ENST00000408314 PRKDCP78527 4128 aaKnown RBP7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 TRAV1-2A0A0B4J238 106 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 METTL21EPA6NDL7 271 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 DENRO43583 198 aaKnown RBP7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 SCGNO76038 276 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 SPDEFO95238 335 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 DIRAS3O95661 229 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 IGHG4P01861 327 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 CD3GP09693 182 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 FABP5Q01469 135 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 CBX3Q13185 183 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 PLGLAQ15195 96 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 C10orf99Q6UWK7 81 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 TMEM91Q6ZNR0 172 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 C8orf86Q6ZUL3 223 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 OR5M8Q8NGP6 311 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 IFI27L2Q9H2X8 130 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 PLSCR3Q9NRY6 295 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 AK3Q9UIJ7 227 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 LINC00527Q9UJ94 153 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 ZNF221Q9UK13 617 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 RNF150Q9ULK6 438 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 WASHC3Q9Y3C0 194 aa7.15□□□□□ -1.26
SNORD88A-201ENST00000408314 TRDV1A0A1B0GX56 115 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 ZNF736B4DX44 427 aaPredicted RBP7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 H7C2Y5 167 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 ST8SIA5O15466 376 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 SOCS1O15524 211 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 NDUFA3O95167 84 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 APOA2P02652 100 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 GSTP1P09211 210 aaKnown RBP7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 SLC2A2P11168 524 aaPredicted RBP7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 RAB3BP20337 219 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 RAB6AP20340 208 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 CD40LGP29965 261 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 CEACAM6P40199 344 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 VEGFCP49767 419 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 F2RL1P55085 397 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 TAGLNQ01995 201 aaKnown RBP7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 TMEM267Q0VDI3 215 aaPredicted RBP7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 C5orf64Q2M2E5 130 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 ZNF660Q6AZW8 331 aaPredicted RBP7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 PYHIN1Q6K0P9 492 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 LIN54Q6MZP7 749 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 FAM53AQ6NSI3 398 aaPredicted RBP7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 FAM131AQ6UXB0 335 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 Q6ZPA2 131 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 ODF3L1Q8IXM7 274 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 NPBQ8NG41 125 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 OR4A4PQ8NGN8 299 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 C4orf3Q8WVX3 66 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 PTX4Q96A99 478 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 RAB3CQ96E17 227 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 ARHGAP5-AS1Q96IT6 56 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 KCTD7Q96MP8 289 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 P2RX4Q99571 388 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 TSNAXQ99598 290 aaKnown RBP7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 YTHDF1Q9BYJ9 559 aaKnown RBP7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 OR51J1Q9H342 316 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 KCNK15Q9H427 330 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 Q9N2K0 584 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 PARP11Q9NR21 331 aa7.14□□□□□ -1.27
SNORD88A-201ENST00000408314 A0A0A6YYD4 124 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 TRAV41A0A0B4J266 112 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 IFITM5A6NNB3 132 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 FOXI3A8MTJ6 420 aaPredicted RBP7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 TRDCB7Z8K6 153 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 CCL24O00175 119 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 RAMP3O60896 148 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 TALDO1P37837 337 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 MAP2K4P45985 399 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 OR3A3P47888 321 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 RAB25P57735 213 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 CFHR3Q02985 330 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 EGFEM1PQ0D2K5 195 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 C2orf76Q3KRA6 126 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 C9orf66Q5T8R8 295 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 HES5Q5TA89 166 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 CD200R1LQ6Q8B3 271 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 ETV3LQ6ZN32 361 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 PDPNQ86YL7 162 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 HSPB9Q9BQS6 159 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 PECRQ9BY49 303 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 C11orf54Q9H0W9 315 aaPredicted RBP7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 VSIG4Q9Y279 399 aa7.13□□□□□ -1.27
SNORD88A-201ENST00000408314 TMEM272A0A1B0GTI8 110 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 LINC01548A6NM66 108 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 RRHO14718 337 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 ARPC1BO15143 372 aaKnown RBP7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 LDLRAD4O15165 306 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 ATP6V0E1O15342 81 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 FABP7O15540 132 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 ATP6V1G2O95670 118 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 PRB2P02812 416 aaPredicted RBP7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 RPLP1P05386 114 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms