RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 KHDC3LQ587J8 217 aa11.47□□□□□ -0.57
CACNA1C-222ENST00000406454 SAXO1Q8IYX7 474 aa11.47□□□□□ -0.57
CACNA1C-222ENST00000406454 TMEM171Q8WVE6 324 aa11.47□□□□□ -0.57
CACNA1C-222ENST00000406454 SBF2Q86WG5 1849 aa11.47□□□□□ -0.57
CACNA1C-222ENST00000406454 ELOA3CA0A087WX78 387 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 CTSSP25774 331 aa11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 ATRXP46100 2492 aa11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 SRSF10O75494 262 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 CRYBA2P53672 197 aa11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 Q96M66 194 aa11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 MAP1BP46821 2468 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 P01737 135 aa11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 KLRB1Q12918 225 aa11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 TMEM97Q5BJF2 176 aa11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 OR1L1Q8NH94 360 aa11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 AICDAQ9GZX7 198 aa11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 KCNMB2Q9Y691 235 aa11.46□□□□□ -0.57
CACNA1C-222ENST00000406454 NPIPB9F8W1W9 429 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 CRISP2P16562 243 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 ZNF645Q8N7E2 425 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 TCTEX1D1Q8N7M0 179 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 IGSF23A1L1A6 192 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 TGFBR3LH3BV60 316 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 PGLYRP1O75594 196 aaPredicted RBP11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 APELAP0DMC3 54 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 SERF2P84101 59 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 NSUN5P2Q63ZY6 315 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 OR5R1Q8NH85 324 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 NPAS1Q99742 590 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 WNK3Q9BYP7 1800 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 TMEM14DPA8MWL7 114 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 UBE2V2Q15819 145 aa11.46□□□□□ -0.58
CACNA1C-222ENST00000406454 TEX50A0A1B0GTY4 177 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 LTBRP36941 435 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 ERVFRD-1P60508 538 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 NHLH1Q02575 133 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 H1FOOQ8IZA3 346 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 OR8I2Q8N0Y5 310 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 LOC101059948A0A1B0GTJ6 334 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 RPLP1P05386 114 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 OR5AL1P0C617 328 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 MS4A7Q9GZW8 240 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 IFT22Q9H7X7 185 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 RP1L1Q8IWN7 2480 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 ZNF716A6NP11 495 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 SEMA7AO75326 666 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 GREB1LQ9C091 1923 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 COL5A1-AS1Q5SY13 56 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 C5orf17Q8NAS9 161 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 ZNF253O75346 499 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 COL8A1P27658 744 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 IL22RA2Q969J5 263 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 SRD5A3Q9H8P0 318 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 NPVFQ9HCQ7 196 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 ZDHHC8Q9ULC8 765 aa11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 CHCHD2Q9Y6H1 151 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-222ENST00000406454 PGA5P0DJD9 388 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 CRIPAKQ8N1N5 446 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 KLF14Q8TD94 323 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 MRAP2Q96G30 205 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 FOXC2Q99958 501 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 PCGF1Q9BSM1 259 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 SOX21Q9Y651 276 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 RNF224P0DH78 156 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 C19orf57Q0VDD7 668 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 NCMAPQ5T1S8 102 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 PARP14Q460N5 1801 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 RECKO95980 971 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 ZNF880Q6PDB4 577 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 XIRP1Q702N8 1843 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 COL11A1P12107 1806 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 LOC390937A0A1W2PQ73 354 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 NMBP08949 121 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 RPL27AP46776 148 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 NRIP2Q9BQI9 281 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 LPAR2Q9HBW0 351 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 SCN8AQ9UQD0 1980 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 RTTNQ86VV8 2226 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 BCL2P10415 239 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 HLA-DRB5Q30154 266 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 OR1L6Q8NGR2 347 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 FAM222BQ8WU58 562 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 GPR146Q96CH1 333 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 OR2T8A6NH00 312 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 CD74P04233 296 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 WNT5AP41221 380 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 TMEM183BQ1AE95 376 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 ZNF660Q6AZW8 331 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 TMEM208Q9BTX3 173 aa11.44□□□□□ -0.58
CACNA1C-222ENST00000406454 IGHV3-21A0A0B4J1V1 117 aa11.43□□□□□ -0.58
CACNA1C-222ENST00000406454 ECSCRQ19T08 205 aa11.43□□□□□ -0.58
CACNA1C-222ENST00000406454 TIMP4Q99727 224 aa11.43□□□□□ -0.58
CACNA1C-222ENST00000406454 TUBD1Q9UJT1 453 aa11.43□□□□□ -0.58
CACNA1C-222ENST00000406454 MC5RP33032 325 aa11.43□□□□□ -0.58
CACNA1C-222ENST00000406454 ZNF658BQ4V348 819 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-222ENST00000406454 CXorf66Q5JRM2 361 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-222ENST00000406454 MRPL54Q6P161 138 aaKnown RBP11.43□□□□□ -0.58
CACNA1C-222ENST00000406454 BRWD3Q6RI45 1802 aa11.43□□□□□ -0.58
CACNA1C-222ENST00000406454 ODAMA1E959 279 aa11.43□□□□□ -0.58
CACNA1C-222ENST00000406454 C21orf62-AS1Q17RA5 79 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms