RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 ABI3Q9P2A4 366 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 CTXND1A0A1B0GTU2 59 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 H3BMH7 237 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 RBFOX2O43251 390 aaKnown RBP eCLIP12.06□□□□□ -0.48
DUSP28-202ENST00000405954 GPX1P07203 203 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 LILRA6Q6PI73 481 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 C12orf54Q6X4T0 127 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 VASH2Q86V25 355 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 CA13Q8N1Q1 262 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 KIR3DX1Q9H7L2 352 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 GNB4Q9HAV0 340 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 TRAV1-1A0A0B4J248 108 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 MUC21A0A0G2JKD1 596 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 MUC21A0A140T8X8 626 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 CYR61O00622 381 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 TMEM50AO95807 157 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 RSPO4Q2I0M5 234 aaPredicted RBP12.05□□□□□ -0.48
DUSP28-202ENST00000405954 MUC21Q5SSG8 566 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 PATE1Q8WXA2 126 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 DNASE2BQ8WZ79 361 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 LRFN3Q9BTN0 628 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 PEF1Q9UBV8 284 aaKnown RBP12.05□□□□□ -0.48
DUSP28-202ENST00000405954 PPIAL4DF5H284 164 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 ETV2O00321 342 aaPredicted RBP12.05□□□□□ -0.48
DUSP28-202ENST00000405954 TOMM40O96008 361 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 TSACCQ96A04 125 aaPredicted RBP12.05□□□□□ -0.48
DUSP28-202ENST00000405954 CCL28Q9NRJ3 127 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 TAAR3PQ9P1P4 343 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 HCRTR1O43613 425 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 NAPSAO96009 420 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 CXCL10P02778 98 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 EDDM3BP56851 147 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 TCTAP57738 103 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 RPEL1Q2QD12 228 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 HLA-BQ31612 363 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 PIGYQ3MUY2 71 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 ADAMTSL4Q6UY14 1074 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 OR10W1Q8NGF6 305 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 TBC1D29Q9UFV1 150 aa12.05□□□□□ -0.48
DUSP28-202ENST00000405954 PLPP3O14495 311 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 ZNF207O43670 478 aaKnown RBP12.04□□□□□ -0.48
DUSP28-202ENST00000405954 SLC25A6P12236 298 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 C2orf27AQ580R0 203 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 OR5B3Q8NH48 314 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 TAF15Q92804 592 aaKnown RBP eCLIP12.04□□□□□ -0.48
DUSP28-202ENST00000405954 TECRQ9NZ01 308 aaKnown RBP12.04□□□□□ -0.48
DUSP28-202ENST00000405954 C17orf112F2Z3M2 114 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 TLX3O43711 291 aaPredicted RBP12.04□□□□□ -0.48
DUSP28-202ENST00000405954 CISD3P0C7P0 127 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 CAPZBP47756 277 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 PSG9Q00887 426 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 PAX2Q02962 417 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 TFF2Q03403 129 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 ZNF726P1Q15940 193 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 ZNF542PQ5EBM4 170 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 C9orf40Q8IXQ3 194 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 SELENOHQ8IZQ5 122 aaKnown RBP12.04□□□□□ -0.48
DUSP28-202ENST00000405954 NINJ1Q92982 152 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 LIME1Q9H400 295 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 ELOVL5Q9NYP7 299 aa12.04□□□□□ -0.48
DUSP28-202ENST00000405954 MRPS16Q9Y3D3 137 aaKnown RBP12.04□□□□□ -0.48
DUSP28-202ENST00000405954 TSPAN2O60636 221 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 VENTXO95231 258 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 IL11P20809 199 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 HNRNPA1L2Q32P51 320 aaKnown RBP12.03□□□□□ -0.48
DUSP28-202ENST00000405954 PDLIM3Q53GG5 364 aaPredicted RBP12.03□□□□□ -0.48
DUSP28-202ENST00000405954 SLC25A34Q6PIV7 304 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 PLPPR1Q8TBJ4 325 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 APOBEC3DQ96AK3 386 aaPredicted RBP12.03□□□□□ -0.48
DUSP28-202ENST00000405954 KLHDC3Q9BQ90 382 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 PPP1R3CQ9UQK1 317 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 TYMSP04818 313 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 RPP25LQ8N5L8 163 aaKnown RBP12.03□□□□□ -0.48
DUSP28-202ENST00000405954 MBD3L1Q8WWY6 194 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 MOB1AQ9H8S9 216 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 IGKV1D-43A0A0B4J1Z2 117 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 SLC22A20A6NK97 555 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 TMEM150CB9EJG8 249 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 ATP5G3P48201 142 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 H1FNTQ75WM6 255 aaPredicted RBP12.03□□□□□ -0.48
DUSP28-202ENST00000405954 OR2T6Q8NHC8 308 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 TICRRQ7Z2Z1 1910 aa12.03□□□□□ -0.48
DUSP28-202ENST00000405954 FER1L6-AS1Q8NA97 138 aa12.02□□□□□ -0.48
DUSP28-202ENST00000405954 OR1B1Q8NGR6 318 aa12.02□□□□□ -0.48
DUSP28-202ENST00000405954 CD207Q9UJ71 328 aa12.02□□□□□ -0.48
DUSP28-202ENST00000405954 TRAV9-2A0A087WT02 112 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 ZNF324O75467 553 aaPredicted RBP12.02□□□□□ -0.49
DUSP28-202ENST00000405954 NEURL1O76050 574 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 CA7P43166 264 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 MFAP5Q13361 173 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 KIR2DS3Q14952 304 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 PIGCQ92535 297 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 MTCH1Q9NZJ7 389 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 G3V3Y1 287 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 IGHG1P01857 330 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 ZNF83P51522 516 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 ZXDAP98168 799 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 ACSF3Q4G176 576 aaPredicted RBP12.02□□□□□ -0.49
DUSP28-202ENST00000405954 ZDHHC23Q8IYP9 409 aa12.02□□□□□ -0.49
DUSP28-202ENST00000405954 PNKDQ8N490 385 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms