RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 CNN1P51911 297 aaKnown RBP13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 SHBQ15464 509 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 SPATA45Q537H7 98 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 TMEM41BQ5BJD5 291 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 FAM69BQ5VUD6 431 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 AMMECR1LQ6DCA0 310 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 BRICD5Q6PL45 260 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR5C1Q8NGR4 320 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 TMEM171Q8WVE6 324 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 RLN3Q8WXF3 142 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 ABHD14BQ96IU4 210 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 TMEM222Q9H0R3 208 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 GTSF1LQ9H1H1 148 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 PLEK2Q9NYT0 353 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 MYO7BQ6PIF6 2116 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 A0A1B0GUS0 222 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 GDF9O60383 454 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 SERPINA7P05543 415 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 AADACP22760 399 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 RPL23AP62750 156 aaKnown RBP13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 CFHR1Q03591 330 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 ZNF92Q03936 586 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 ZNF695Q8IW36 515 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR10G3Q8NGC4 313 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR4P4Q8NGL7 312 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 ZNF501Q96CX3 271 aaPredicted RBP13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 UBE2J1Q9Y385 318 aaPredicted RBP13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 PTRH2Q9Y3E5 179 aaKnown RBP13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 GABRA2P47869 451 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 PRDX4Q13162 271 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 FAM71F2Q6NXP2 309 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 ASCL4Q6XD76 172 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR8I2Q8N0Y5 310 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 FER1L6-AS1Q8NA97 138 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 SUMF1Q8NBK3 374 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 CLDND2Q8NHS1 167 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 BORCS8Q96FH0 119 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 ABHD17AQ96GS6 310 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 IGHV1-69-2A0A0G2JMI3 117 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 DUX1O43812 170 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 SSSCA1O60232 199 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR10J4P0C629 311 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 ESDP10768 282 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 FOXL2NBQ6ZUU3 175 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 VASH2Q86V25 355 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 OSR2Q8N2R0 312 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 DEFB119Q8N690 84 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR10G4Q8NGN3 311 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 TMEM54Q969K7 222 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 NABP1Q96AH0 204 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 IMMP2LQ96T52 175 aa13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 RBM24Q9BX46 236 aaKnown RBP13.84□□□□□ -0.19
COL4A3BP-204ENST00000405807 IGKV1-27A0A075B6S5 117 aa13.83□□□□□ -0.19
COL4A3BP-204ENST00000405807 KLRC4-KLRK1H3BQV0 150 aa13.83□□□□□ -0.19
COL4A3BP-204ENST00000405807 CTRLP40313 264 aa13.83□□□□□ -0.19
COL4A3BP-204ENST00000405807 SUMO1P63165 101 aaKnown RBP13.83□□□□□ -0.19
COL4A3BP-204ENST00000405807 BAXQ07812 192 aa13.83□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR8B8Q15620 311 aa13.83□□□□□ -0.19
COL4A3BP-204ENST00000405807 PHYHD1Q5SRE7 291 aa13.83□□□□□ -0.19
COL4A3BP-204ENST00000405807 PLK3Q9H4B4 646 aa13.83□□□□□ -0.19
COL4A3BP-204ENST00000405807 A0A1B0GW15 77 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 A0A1W2PR77 199 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 TRAPPC2LH3BP13 241 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 DHHO43323 396 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 PPYP01298 95 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 DYNLT3P51808 116 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 FAM3BP58499 235 aaPredicted RBP13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 MALLQ13021 153 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 RSPO4Q2I0M5 234 aaPredicted RBP13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 PIGYQ3MUY2 71 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 TMEM211Q6ICI0 200 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 MRGPRGQ86SM5 289 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 TGIF2LYQ8IUE0 185 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 CLEC1BQ9P126 229 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 RALGAPA1Q6GYQ0 2036 aa13.83□□□□□ -0.2
COL4A3BP-204ENST00000405807 NCOA6Q14686 2063 aaPredicted RBP13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 GFRA1P56159 465 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 NECAP1Q8NC96 275 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 PYGO2Q9BRQ0 406 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 EXPH5Q8NEV8 1989 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 EPOPA6NHQ4 379 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 ZFAND5O76080 213 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 CST7O76096 145 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 CD27P26842 260 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 SRSF7Q16629 238 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 ACTL10Q5JWF8 245 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 RASL10BQ96S79 203 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 IGLV3-12A0A075B6K2 115 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 PDCD6O75340 191 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 TCN2P20062 427 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 TSPOP30536 169 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 PNRC1Q12796 327 aaPredicted RBP13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 CXorf66Q5JRM2 361 aaPredicted RBP13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 OR2AE1Q8NHA4 323 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 GUCD1Q96NT3 240 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 CITED1Q99966 193 aa13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 MRPS16Q9Y3D3 137 aaKnown RBP13.82□□□□□ -0.2
COL4A3BP-204ENST00000405807 MAP1LC3B2A6NCE7 125 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 ZNF716A6NP11 495 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 PFN1P07737 140 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms