RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 HNF1AP20823 631 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 IL3RAP26951 378 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 HTR1DP28221 377 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 ECI1P42126 302 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 ZNF137PP52743 207 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 HERV-K104P61576 105 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 AADACL3Q5VUY0 350 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 FAAP20Q6NZ36 180 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 LPCAT3Q6P1A2 487 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 ODF3L1Q8IXM7 274 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 OR51S1Q8NGJ8 323 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 OR10X1Q8NGY0 326 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 MOB3AQ96BX8 217 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 MALSU1Q96EH3 234 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 GSX1Q9H4S2 264 aaPredicted RBP10□□□□□ -0.81
LINC00339-201ENST00000404210 MCUBQ9NWR8 336 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 ZNF221Q9UK13 617 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 RNF150Q9ULK6 438 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 MAP1AP78559 2803 aaPredicted RBP10□□□□□ -0.81
LINC00339-201ENST00000404210 IGKV1D-13A0A0B4J2D9 117 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 LINC00854A0A1B0GVQ3 168 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 A0A1W2PRD5 423 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 A0A1W2PRF3 423 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 A0A1W2PRM7 423 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 OR5H14A6NHG9 310 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 LYRM1O43325 122 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 IGKV1-13P0DP09 117 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 CEACAM3P40198 252 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 MSMO1Q15800 293 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 PLA1AQ53H76 456 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 FAM71F2Q6NXP2 309 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 C16orf87Q6PH81 154 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 C9orf139Q6ZV77 190 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 LDLRAD3Q86YD5 345 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 LYG1Q8N1E2 194 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-201ENST00000404210 ZBTB34Q8NCN2 500 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 ST6GALNAC6Q969X2 333 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 ABHD14BQ96IU4 210 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 AKR1E2Q96JD6 320 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 S1PR3Q99500 378 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 IFI27L2Q9H2X8 130 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 PALMDQ9NP74 551 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 FLNAP21333 2647 aaKnown RBP9.99□□□□□ -0.81
LINC00339-201ENST00000404210 CSPG4Q6UVK1 2322 aa9.99□□□□□ -0.81
LINC00339-201ENST00000404210 SETXQ7Z333 2677 aaKnown RBP9.99□□□□□ -0.81
LINC00339-201ENST00000404210 IGHV3OR16-10A0A075B7F0 116 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 OOSP1A8MZH6 123 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 GAPDHP04406 335 aaKnown RBP9.98□□□□□ -0.81
LINC00339-201ENST00000404210 EPHA1P21709 976 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 GPR12P47775 334 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 FXYD4P59646 89 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 ZNF816Q0VGE8 651 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-201ENST00000404210 ASAH1Q13510 395 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 SURF2Q15527 256 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-201ENST00000404210 SCGB2B2Q4G0G5 96 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 LDLRAD2Q5SZI1 272 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 MZT2BQ6NZ67 158 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 BRD3OSQ6XYD6 125 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 IDO2Q6ZQW0 420 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 LHFPL4Q7Z7J7 247 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 ZNF645Q8N7E2 425 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 OR13C8Q8NGS7 320 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 SECTM1Q8WVN6 248 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 AJUBAQ96IF1 538 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 SCGB3A2Q96PL1 93 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 SLC5A7Q9GZV3 580 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 MS4A7Q9GZW8 240 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-201ENST00000404210 MEGF9Q9H1U4 602 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 CCL28Q9NRJ3 127 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 ZNRD1Q9P1U0 126 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 TBC1D24Q9ULP9 559 aa9.98□□□□□ -0.81
LINC00339-201ENST00000404210 ACANP16112 2415 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 OTOGQ6ZRI0 2925 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 TEX15Q9BXT5 2789 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 PROP1O75360 226 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 IGLV2-14P01704 120 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 GNRHRP30968 328 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 SAA4P35542 130 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 SRP14P37108 136 aaKnown RBP9.97□□□□□ -0.81
LINC00339-201ENST00000404210 DEFA1P59665 94 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 DEFA3P59666 94 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 TPTE2P1Q5T6R2 138 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 RUSC1-AS1Q66K80 236 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 ZNF833PQ6ZTB9 187 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 SLC38A6Q8IZM9 456 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 ZFAND1Q8TCF1 268 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 RPEQ96AT9 228 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 SLC25A21Q9BQT8 299 aaPredicted RBP9.97□□□□□ -0.81
LINC00339-201ENST00000404210 ZNF251Q9BRH9 671 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 RSRP1Q9BUV0 290 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 BEX2Q9BXY8 128 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 FXYD6Q9H0Q3 95 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 OR2D2Q9H210 308 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 SDHAF2Q9NX18 166 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 CDC42EP3Q9UKI2 254 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 GPR132Q9UNW8 380 aa9.97□□□□□ -0.81
LINC00339-201ENST00000404210 SAA2-SAA4A0A096LPE2 208 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 GPR31O00270 319 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 HSD17B6O14756 317 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms