RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 ZNF816Q0VGE8 651 aaPredicted RBP23.66■■□□□ 1.38
USP42-202ENST00000404008 LRRC75BQ2VPJ9 315 aa23.66■■□□□ 1.38
USP42-202ENST00000404008 PYDC2Q56P42 97 aa23.66■■□□□ 1.38
USP42-202ENST00000404008 CCDC144NLQ6NUI1 221 aa23.66■■□□□ 1.38
USP42-202ENST00000404008 OVCH2Q7RTZ1 564 aa23.66■■□□□ 1.38
USP42-202ENST00000404008 FAM216AQ8WUB2 273 aa23.66■■□□□ 1.38
USP42-202ENST00000404008 SSMEM1Q8WWF3 244 aa23.66■■□□□ 1.38
USP42-202ENST00000404008 GHITMQ9H3K2 345 aa23.66■■□□□ 1.38
USP42-202ENST00000404008 JMJD1CQ15652 2540 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 SAA2-SAA4A0A096LPE2 208 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 TUSC2O75896 110 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 IGHV4-59P01825 116 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 SAA2P0DJI9 122 aaPredicted RBP23.65■■□□□ 1.38
USP42-202ENST00000404008 RFX2P48378 723 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 LINC00299Q6ZSB3 139 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 RTN4IP1Q8WWV3 396 aaPredicted RBP23.65■■□□□ 1.38
USP42-202ENST00000404008 ABHD14BQ96IU4 210 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 SSX3Q99909 188 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 EHFQ9NZC4 300 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 PIPOXQ9P0Z9 390 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 OR2W1Q9Y3N9 320 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 A0A1W2PPI3 338 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 DNAJC9-AS1A6NH13 148 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 ZNF736B4DX44 427 aaPredicted RBP23.65■■□□□ 1.38
USP42-202ENST00000404008 RAB29O14966 203 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 GAPDHP04406 335 aaKnown RBP23.65■■□□□ 1.38
USP42-202ENST00000404008 OR8U9P0C7N5 309 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 REG1BP48304 166 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 DYRK1AQ13627 763 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 ZNF833PQ6ZTB9 187 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 ZDHHC22Q8N966 263 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 OR8U1Q8NH10 309 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 JMJD8Q96S16 334 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 ZNF107Q9UII5 783 aaPredicted RBP23.65■■□□□ 1.38
USP42-202ENST00000404008 RNF150Q9ULK6 438 aa23.65■■□□□ 1.38
USP42-202ENST00000404008 LANCL1O43813 399 aa23.64■■□□□ 1.37
USP42-202ENST00000404008 FCGR2CP31995 323 aa23.64■■□□□ 1.37
USP42-202ENST00000404008 DYNLT3P51808 116 aa23.64■■□□□ 1.37
USP42-202ENST00000404008 ARHGDIBP52566 201 aa23.64■■□□□ 1.37
USP42-202ENST00000404008 SLC9A3R2Q15599 337 aa23.64■■□□□ 1.37
USP42-202ENST00000404008 ACTBL2Q562R1 376 aa23.64■■□□□ 1.37
USP42-202ENST00000404008 OR8H3Q8N146 312 aa23.64■■□□□ 1.37
USP42-202ENST00000404008 TMEM229BQ8NBD8 167 aa23.64■■□□□ 1.37
USP42-202ENST00000404008 DPAGT1Q9H3H5 408 aa23.64■■□□□ 1.37
USP42-202ENST00000404008 POMT1Q9Y6A1 747 aa23.64■■□□□ 1.37
USP42-202ENST00000404008 H3BUX3 64 aa23.63■■□□□ 1.37
USP42-202ENST00000404008 VENTXO95231 258 aa23.63■■□□□ 1.37
USP42-202ENST00000404008 PRIMA1Q86XR5 153 aa23.63■■□□□ 1.37
USP42-202ENST00000404008 TGIF2LXQ8IUE1 241 aa23.63■■□□□ 1.37
USP42-202ENST00000404008 Q8N402 240 aa23.63■■□□□ 1.37
USP42-202ENST00000404008 TMEM86BQ8N661 226 aa23.63■■□□□ 1.37
USP42-202ENST00000404008 PIFOQ8TCI5 191 aa23.63■■□□□ 1.37
USP42-202ENST00000404008 ZNF251Q9BRH9 671 aa23.63■■□□□ 1.37
USP42-202ENST00000404008 SRRQ9GZT4 340 aa23.63■■□□□ 1.37
USP42-202ENST00000404008 OR2D2Q9H210 308 aa23.63■■□□□ 1.37
USP42-202ENST00000404008 IGHV1-3A0A0C4DH29 117 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 CLDN34H7C241 214 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 TXNL1O43396 289 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 CD3DP04234 171 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 TBPP20226 339 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 AADACP22760 399 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 GPR12P47775 334 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 RAB13P51153 203 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 ZNF660Q6AZW8 331 aaPredicted RBP23.62■■□□□ 1.37
USP42-202ENST00000404008 FAM71F2Q6NXP2 309 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 DHRS11Q6UWP2 260 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 GIMAP1Q8WWP7 306 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 DUX5Q96PT3 197 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 THAP7Q9BT49 309 aaPredicted RBP23.62■■□□□ 1.37
USP42-202ENST00000404008 ABCB10Q9NRK6 738 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 ZNF221Q9UK13 617 aa23.62■■□□□ 1.37
USP42-202ENST00000404008 TIMM23O14925 209 aa23.61■■□□□ 1.37
USP42-202ENST00000404008 CSF1P09603 554 aa23.61■■□□□ 1.37
USP42-202ENST00000404008 LUMP51884 338 aaPredicted RBP23.61■■□□□ 1.37
USP42-202ENST00000404008 TAS2R19P59542 299 aa23.61■■□□□ 1.37
USP42-202ENST00000404008 RPL39P5Q59GN2 51 aa23.61■■□□□ 1.37
USP42-202ENST00000404008 VAX1Q5SQQ9 334 aa23.61■■□□□ 1.37
USP42-202ENST00000404008 OR5R1Q8NH85 324 aa23.61■■□□□ 1.37
USP42-202ENST00000404008 CFHR4Q92496 578 aa23.61■■□□□ 1.37
USP42-202ENST00000404008 S1PR3Q99500 378 aa23.61■■□□□ 1.37
USP42-202ENST00000404008 TAS2R8Q9NYW2 309 aa23.61■■□□□ 1.37
USP42-202ENST00000404008 RBM7Q9Y580 266 aaKnown RBP23.61■■□□□ 1.37
USP42-202ENST00000404008 IGKV1D-13A0A0B4J2D9 117 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 M0QYG6 137 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 PPYP01298 95 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 IGKV1-13P0DP09 117 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 BRS3P32247 399 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 ZNF45Q02386 682 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 MFSD4AQ8N468 514 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 DRAM1Q8N682 238 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 TRIM63Q969Q1 353 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 AKIP1Q9NQ31 210 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 TNFRSF19Q9NS68 423 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 GAB2Q9UQC2 676 aa23.6■■□□□ 1.37
USP42-202ENST00000404008 BTBD17A6NE02 478 aa23.59■■□□□ 1.37
USP42-202ENST00000404008 J3QRK9 145 aa23.59■■□□□ 1.37
USP42-202ENST00000404008 CD74P04233 296 aa23.59■■□□□ 1.37
USP42-202ENST00000404008 HABP2Q14520 560 aaPredicted RBP23.59■■□□□ 1.37
USP42-202ENST00000404008 RNASE10Q5GAN6 216 aaKnown RBP23.59■■□□□ 1.37
USP42-202ENST00000404008 ZNF436-AS1Q8NC38 126 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms