RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 EBI3Q14213 229 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 BEAN1Q3B7T3 259 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 TMEM30BQ3MIR4 351 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 MOGAT2Q3SYC2 334 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 RPL39P5Q59GN2 51 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 PLAC9Q5JTB6 97 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 ZNF880Q6PDB4 577 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 LCNL1Q6ZST4 164 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 SLC35E3Q7Z769 313 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 ZNF554Q86TJ5 538 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 NR2C2APQ86WQ0 139 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 FAM89BQ8N5H3 189 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 Q8N9W7 124 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR4F17Q8NGA8 305 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR4X2Q8NGF9 303 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 GALMQ96C23 342 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 ABHD14BQ96IU4 210 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 RITA1Q96K30 269 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 YPEL2Q96QA6 119 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR4F4Q96R69 305 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 S1PR3Q99500 378 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 HSPB9Q9BQS6 159 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 PECRQ9BY49 303 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 IFI27L2Q9H2X8 130 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 Q9H521 79 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 PLSCR3Q9NRY6 295 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 ABRACLQ9P1F3 81 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR1A1Q9P1Q5 309 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 STEAP1Q9UHE8 339 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 DNAH3Q8TD57 4116 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 SAA2-SAA4A0A096LPE2 208 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 TRAV1-2A0A0B4J238 106 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 IGKV1-6A0A0C4DH72 117 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 IFITM5A6NNB3 132 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 PDCD5O14737 125 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 TXNL1O43396 289 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 RGS11O94810 467 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 IGHG2P01859 326 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 SCTP09683 121 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 CD3GP09693 182 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 CLEC2LP0C7M8 214 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 SAA2P0DJI9 122 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 PF4V1P10720 104 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 RAB3BP20337 219 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 MYL9P24844 172 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 CEACAM6P40199 344 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 LINC00205P59089 165 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 ACTBP60709 375 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 HLA-DRB3P79483 266 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 MMDQ15546 238 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 ZNF124Q15973 351 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 UBE2UQ5VVX9 321 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 STEAP3Q658P3 488 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 CD200R1LQ6Q8B3 271 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 GLDNQ6ZMI3 551 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 ZNF833PQ6ZTB9 187 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 MOB1BQ7L9L4 216 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 STPG2Q8N412 459 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR2AK2Q8NG84 335 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR56B1Q8NGI3 324 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 MAFIPQ8WZ33 124 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 DUX3Q96PT4 197 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 RASL11BQ9BPW5 248 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 NABP2Q9BQ15 211 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 CMSS1Q9BQ75 279 aaKnown RBP4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 ZNF251Q9BRH9 671 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 C11orf54Q9H0W9 315 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 ABCG5Q9H222 651 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR51E2Q9H255 320 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 RNF167Q9H6Y7 350 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 Q9N2K0 584 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 C12orf4Q9NQ89 552 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 LIN7CQ9NUP9 197 aaKnown RBP4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 SLC23A1Q9UHI7 598 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 ELF5Q9UKW6 265 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 RNF150Q9ULK6 438 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 HSF4Q9ULV5 492 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 KCNK7Q9Y2U2 307 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 RRP15Q9Y3B9 282 aaKnown RBP4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 LRRC42Q9Y546 428 aa4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 TSSC4Q9Y5U2 329 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P20-201ENST00000402555 TRBV6-6A0A0A6YYG2 114 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 NUDT19A8MXV4 375 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 RAB27BO00194 218 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 HSPA12AO43301 675 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 MRPS14O60783 128 aaKnown RBP4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 PF4P02776 101 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 CT45A6P0DMU7 189 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 CT45A5P0DMU8 189 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 CT45A7P0DMV0 189 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 IGLL1P15814 213 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 GNB3P16520 340 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 PSMD7P51665 324 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 RPL23AP62750 156 aaKnown RBP4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 MXD1Q05195 221 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 NEDD8Q15843 81 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 LY6G6FQ5SQ64 297 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 ZNF773Q6PK81 442 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 FAM131AQ6UXB0 335 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 ETV3LQ6ZN32 361 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms