RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 RDH5Q92781 318 aa13.42□□□□□ -0.26
CHRFAM7A-203ENST00000401522 MALSU1Q96EH3 234 aa13.42□□□□□ -0.26
CHRFAM7A-203ENST00000401522 RAB40CQ96S21 281 aa13.42□□□□□ -0.26
CHRFAM7A-203ENST00000401522 RARRES2Q99969 163 aa13.42□□□□□ -0.26
CHRFAM7A-203ENST00000401522 C5orf52A6NGY3 159 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 OR5H1A6NKK0 313 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 HBE1P02100 147 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 S100A6P06703 90 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 MAS1LP35410 378 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 PAX9P55771 341 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 RAB2AP61019 212 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 SNRPEP62304 92 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 CCL20P78556 96 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 S100A12P80511 92 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 TLE4Q04727 773 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 KRBOX4Q5JUW0 171 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 TIMM23BQ5SRD1 257 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 SP5Q6BEB4 398 aaPredicted RBP13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 RNASE6Q93091 150 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 S100PBPQ96BU1 408 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 RBMXL1Q96E39 390 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 ABHD14AQ9BUJ0 271 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 OBP2BQ9NPH6 170 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 TREM2Q9NZC2 230 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 UBE2CO00762 179 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 LILRA1O75019 489 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 DAOP14920 347 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 TAS2R30P59541 319 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 TFF3Q07654 80 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 ZNF154Q13106 437 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 TMEM217Q8N7C4 229 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 WDR31Q8NA23 367 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 OR10V1Q8NGI7 309 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 LSM10Q969L4 123 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 ISOC2Q96AB3 205 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 GPR146Q96CH1 333 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 RFNGQ9Y644 331 aa13.41□□□□□ -0.26
CHRFAM7A-203ENST00000401522 J3QW42 95 aa13.4□□□□□ -0.26
CHRFAM7A-203ENST00000401522 S100A8P05109 93 aa13.4□□□□□ -0.26
CHRFAM7A-203ENST00000401522 ZNF14P17017 642 aaPredicted RBP13.4□□□□□ -0.26
CHRFAM7A-203ENST00000401522 HOXC12P31275 282 aa13.4□□□□□ -0.26
CHRFAM7A-203ENST00000401522 CCKARP32238 428 aa13.4□□□□□ -0.26
CHRFAM7A-203ENST00000401522 UBE2NP61088 152 aaKnown RBP13.4□□□□□ -0.26
CHRFAM7A-203ENST00000401522 ZNF506Q5JVG8 444 aa13.4□□□□□ -0.26
CHRFAM7A-203ENST00000401522 Q6P435 159 aa13.4□□□□□ -0.26
CHRFAM7A-203ENST00000401522 Q8IYB0 196 aa13.4□□□□□ -0.26
CHRFAM7A-203ENST00000401522 RTL8AQ9BWD3 113 aa13.4□□□□□ -0.26
CHRFAM7A-203ENST00000401522 MYO18BQ8IUG5 2567 aa13.4□□□□□ -0.26
CHRFAM7A-203ENST00000401522 TXNL1O43396 289 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 EIF3GO75821 320 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 IFNA5P01569 189 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 EPHA1P21709 976 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 CA6P23280 308 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 OR2T2Q6IF00 324 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 OR51H1Q8NH63 302 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 RNASE11Q8TAA1 199 aaKnown RBP13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 PUS1Q9Y606 427 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 WSB1Q9Y6I7 421 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 FLNCQ14315 2725 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 A0A0G2JRQ6 117 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 KIAA1324LA8MWY0 1029 aaPredicted RBP13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 J3QKU1 62 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 NXPH3O95157 252 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 HSPB1P04792 205 aaKnown RBP13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SRP19P09132 144 aaKnown RBP13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 PSG2P11465 335 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SSX8Q7RTT4 187 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 MDP1Q86V88 176 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 METTL1Q9UBP6 276 aaKnown RBP13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SLC25A15Q9Y619 301 aa13.39□□□□□ -0.27
CHRFAM7A-203ENST00000401522 TRAV1-1A0A0B4J248 108 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 hCG_1809904A0A1W2PP81 198 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 A0A1W2PPE2 198 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 A0A1W2PR64 198 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 A0A1W2PRV1 198 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 RHBDL1O75783 438 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 OR2C1O95371 312 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SMIM6P0DI80 62 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 RPS23P62266 143 aaKnown RBP13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 RUNX1Q01196 453 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SRSF1Q07955 248 aaKnown RBP eCLIP13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 ICAM4Q14773 271 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 TBC1D28Q2M2D7 210 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 C22orf34Q6ZV56 151 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 FAM24BQ8N5W8 94 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 FAM169BQ8N8A8 192 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 MUCL1Q96DR8 90 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 OR1A1Q9P1Q5 309 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 POLDIP2Q9Y2S7 368 aa13.38□□□□□ -0.27
CHRFAM7A-203ENST00000401522 A0A1W2PR80 420 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 H3BQ15 152 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 AGFG2O95081 481 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SCAF4O95104 1147 aaKnown RBP13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 ARG1P05089 322 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 CBR1P16152 277 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 CD200P41217 278 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 TESK1Q15569 626 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 HAGHQ16775 308 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 ZNF497Q6ZNH5 498 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms