RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 IL18Q14116 193 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 MORN2Q502X0 79 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 MIDNQ504T8 468 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 ZNF660Q6AZW8 331 aaPredicted RBP7.44□□□□□ -1.22
VPS53-203ENST00000401468 FAM131AQ6UXB0 335 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 SLC25A48Q6ZT89 311 aaKnown RBP7.44□□□□□ -1.22
VPS53-203ENST00000401468 C5orf24Q7Z6I8 188 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 SNX29P2Q8IUI4 249 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 PNKDQ8N490 385 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 GDPD1Q8N9F7 314 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 OR5AP2Q8NGF4 316 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 OR13D1Q8NGV5 346 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 RFESDQ8TAC1 157 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 FCAMRQ8WWV6 532 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 LHX4Q969G2 390 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 AGMATQ9BSE5 352 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 PRDM13Q9H4Q3 707 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 HEXA-AS1Q9H8Q6 139 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 SIRT7Q9NRC8 400 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 KLK11Q9UBX7 282 aa7.44□□□□□ -1.22
VPS53-203ENST00000401468 MRPS7Q9Y2R9 242 aaKnown RBP7.44□□□□□ -1.22
VPS53-203ENST00000401468 IGHV1-69DA0A0B4J2H0 117 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 LY6LH3BQJ8 138 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 SDCBPO00560 298 aaPredicted RBP7.43□□□□□ -1.22
VPS53-203ENST00000401468 IGHV1-69P01742 117 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 ZBTB25P24278 435 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 ZNF134P52741 427 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 SCGB2A2Q13296 93 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 LSAMPQ13449 338 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 GNMTQ14749 295 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 HLA-DRB5Q30154 266 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 IGSF11Q5DX21 431 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 VAX1Q5SQQ9 334 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 LDLRAD2Q5SZI1 272 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 ZNF782Q6ZMW2 699 aaPredicted RBP7.43□□□□□ -1.22
VPS53-203ENST00000401468 OVCH2Q7RTZ1 564 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 H1FOOQ8IZA3 346 aaPredicted RBP7.43□□□□□ -1.22
VPS53-203ENST00000401468 ABHD12Q8N2K0 398 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 TMEM229BQ8NBD8 167 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 OR4P4Q8NGL7 312 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 OR9G1Q8NH87 305 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 DEDD2Q8WXF8 326 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 S100ZQ8WXG8 99 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 MAFIPQ8WZ33 124 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 JMJD8Q96S16 334 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 ST6GALNAC5Q9BVH7 336 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 CLEC7AQ9BXN2 247 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 MMP28Q9H239 520 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 IFT46Q9NQC8 304 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 TAS2R8Q9NYW2 309 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 PSG11Q9UQ72 335 aa7.43□□□□□ -1.22
VPS53-203ENST00000401468 TBL2Q9Y4P3 447 aaKnown RBP7.43□□□□□ -1.22
VPS53-203ENST00000401468 ANKRD20A5PA0PJZ0 165 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 MEIS3P1A6NDR6 274 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 J3QR06 171 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 LANCL1O43813 399 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 RBBP9O75884 186 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 RGS11O94810 467 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 HKR1P10072 659 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 CD40LGP29965 261 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 TAS2R46P59540 309 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 DYRK1AQ13627 763 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 CDK10Q15131 360 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 ACTBL2Q562R1 376 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 CT45A1Q5HYN5 189 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 MINOS1Q5TGZ0 78 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 GPR157Q5UAW9 335 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 FAM53AQ6NSI3 398 aaPredicted RBP7.42□□□□□ -1.22
VPS53-203ENST00000401468 DHRS11Q6UWP2 260 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 LDLRAD3Q86YD5 345 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 ODF3L1Q8IXM7 274 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 Q8N402 240 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 OR52L2PQ8NGH6 319 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 CT45A3Q8NHU0 189 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 UBALD1Q8TB05 177 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 SETD6Q8TBK2 473 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 ZFAND2BQ8WV99 257 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 GIMAP1Q8WWP7 306 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 ST6GALNAC6Q969X2 333 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 CHIAQ9BZP6 476 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 GHITMQ9H3K2 345 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 OR2S2Q9NQN1 319 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 OR1A1Q9P1Q5 309 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 SLC23A1Q9UHI7 598 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 GAB2Q9UQC2 676 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 MINOS1-NBL1R4GNA1 71 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 PLXNB1O43157 2135 aa7.42□□□□□ -1.22
VPS53-203ENST00000401468 KMT2CQ8NEZ4 4911 aaKnown RBP7.41□□□□□ -1.22
VPS53-203ENST00000401468 A0A0U1RQK1 487 aa7.41□□□□□ -1.22
VPS53-203ENST00000401468 BUB1B-PAK6H3BSN5 160 aa7.41□□□□□ -1.22
VPS53-203ENST00000401468 NPFFO15130 113 aa7.41□□□□□ -1.22
VPS53-203ENST00000401468 SLC31A2O15432 143 aa7.41□□□□□ -1.22
VPS53-203ENST00000401468 IGHV4-59P01825 116 aa7.41□□□□□ -1.22
VPS53-203ENST00000401468 CSF1P09603 554 aa7.41□□□□□ -1.22
VPS53-203ENST00000401468 HRH1P35367 487 aa7.41□□□□□ -1.22
VPS53-203ENST00000401468 SAA4P35542 130 aa7.41□□□□□ -1.22
VPS53-203ENST00000401468 PPP1CCP36873 323 aaKnown RBP7.41□□□□□ -1.22
VPS53-203ENST00000401468 COMPP49747 757 aaPredicted RBP7.41□□□□□ -1.22
VPS53-203ENST00000401468 PPP5CP53041 499 aa7.41□□□□□ -1.22
VPS53-203ENST00000401468 TAS2R19P59542 299 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms