RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 RNFT1Q5M7Z0 435 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 CCL17Q92583 94 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 LHX4Q969G2 390 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 MMP24Q9Y5R2 645 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 ZNF883P0CG24 379 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 SUPT4H1P63272 117 aaKnown RBP11.52□□□□□ -0.56
SIRPA-203ENST00000400068 ADIRFQ15847 76 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 CSRP2Q16527 193 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 FAM201AQ5SY85 155 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 LEMD1Q68G75 181 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 POC1AQ8NBT0 407 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 NECAP1Q8NC96 275 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 MOB3AQ96BX8 217 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 TM2D1Q9BX74 207 aa11.52□□□□□ -0.56
SIRPA-203ENST00000400068 ATRXP46100 2492 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 GTF2H5Q6ZYL4 71 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 LEAP2Q969E1 77 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 MISP3Q96FF7 219 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 NIPSNAP3BQ9BS92 247 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 TLNRD1Q9H1K6 362 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 SMCO4Q9NRQ5 59 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 HSF4Q9ULV5 492 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 TMEM131Q92545 1883 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 DEDDO75618 318 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 RPLP1P05386 114 aaKnown RBP11.52□□□□□ -0.57
SIRPA-203ENST00000400068 SNCAP37840 140 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 CCL8P80075 99 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 LYG1Q8N1E2 194 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 C11orf42Q8N5U0 333 aa11.52□□□□□ -0.57
SIRPA-203ENST00000400068 IGKV1D-13A0A0B4J2D9 117 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 A0A1B0GW15 77 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 IGKV1-13P0DP09 117 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 Q8IYB0 196 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 FAM89BQ8N5H3 189 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 NUDT10Q8NFP7 164 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 DCTN5Q9BTE1 182 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 C1QTNF5Q9BXJ0 243 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 TLN1Q9Y490 2541 aaKnown RBP11.51□□□□□ -0.57
SIRPA-203ENST00000400068 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.51□□□□□ -0.574e-8■■■■■ 36.7
SIRPA-203ENST00000400068 FABP4P15090 132 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 IL13RA2Q14627 380 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 ZNF787Q6DD87 383 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 EIF4E3Q8N5X7 224 aaKnown RBP11.51□□□□□ -0.57
SIRPA-203ENST00000400068 ADAMTS17Q8TE56 1095 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 WDYHV1Q96HA8 205 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 POM121L2Q96KW2 1035 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 Q9N2K0 584 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 KPTNQ9Y664 436 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 RAB29O14966 203 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 ATP6V0CP27449 155 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 KLF3P57682 345 aaPredicted RBP11.51□□□□□ -0.57
SIRPA-203ENST00000400068 TMEM187Q14656 261 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 PUSL1Q8N0Z8 303 aaKnown RBP11.51□□□□□ -0.57
SIRPA-203ENST00000400068 OR10P1Q8NGE3 313 aa11.51□□□□□ -0.57
SIRPA-203ENST00000400068 PIGBOS1A0A0B4J2F0 54 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 IGHV1-2P23083 117 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 F2RP25116 425 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 MPV17P39210 176 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 C1orf147Q96MC9 270 aaPredicted RBP11.5□□□□□ -0.57
SIRPA-203ENST00000400068 CXXC4Q9H2H0 198 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 PKIAP61925 76 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 COL10A1Q03692 680 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 PLGLAQ15195 96 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 OR5P3Q8WZ94 311 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 GNPNAT1Q96EK6 184 aaPredicted RBP11.5□□□□□ -0.57
SIRPA-203ENST00000400068 A0A1B0GV72 72 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 PSG7Q13046 419 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 C4orf17Q53FE4 359 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 RSG1Q9BU20 258 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 TMEM222Q9H0R3 208 aa11.5□□□□□ -0.57
SIRPA-203ENST00000400068 STRAPQ9Y3F4 350 aaKnown RBP11.5□□□□□ -0.57
SIRPA-203ENST00000400068 SYNGR2O43760 224 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 PGLYRP1O75594 196 aaPredicted RBP11.49□□□□□ -0.57
SIRPA-203ENST00000400068 GLIPR1P48060 266 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 FOXF2Q12947 444 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 INO80CQ6PI98 192 aaPredicted RBP11.49□□□□□ -0.57
SIRPA-203ENST00000400068 HIST2H3AQ71DI3 136 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 DTX1Q86Y01 620 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 FAM24BQ8N5W8 94 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 TMEM252Q8N6L7 170 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 C9orf106Q8NAJ2 232 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 SLC25A22Q9H936 323 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 RNF122Q9H9V4 155 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 CLN8Q9UBY8 286 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 PQLC2LA1A4F0 135 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 G3V3Q6 166 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 MMP7P09237 267 aaPredicted RBP11.49□□□□□ -0.57
SIRPA-203ENST00000400068 WNT5AP41221 380 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 SRSF3P84103 164 aaKnown RBP11.49□□□□□ -0.57
SIRPA-203ENST00000400068 TNFAIP6P98066 277 aaPredicted RBP11.49□□□□□ -0.57
SIRPA-203ENST00000400068 HIST2H3PS2Q5TEC6 136 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 OR5B12Q96R08 314 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 S1PR3Q99500 378 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 PLEKHA3Q9HB20 300 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 KCNMB2Q9Y691 235 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 CACNA1AO00555 2505 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 NCOR2Q9Y618 2525 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 HBE1P02100 147 aa11.49□□□□□ -0.57
SIRPA-203ENST00000400068 SSTR5P35346 364 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms