RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 RBMXL3Q8N7X1 1067 aaKnown RBP11.9□□□□□ -0.5
SCAF4-202ENST00000399804 POC1AQ8NBT0 407 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 BPIFCQ8NFQ6 507 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 PGA5P0DJD9 388 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 CTRB1P17538 263 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 SUB1P53999 127 aaKnown RBP eCLIP11.9□□□□□ -0.5
SCAF4-202ENST00000399804 CTRB2Q6GPI1 263 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 SNRNP40Q96DI7 357 aaKnown RBP11.9□□□□□ -0.5
SCAF4-202ENST00000399804 KCNIP2Q9NS61 270 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 IL19Q9UHD0 177 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 CEP192Q8TEP8 1941 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 FAM208BQ5VWN6 2430 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 HMGB3O15347 200 aaKnown RBP11.89□□□□□ -0.51
SCAF4-202ENST00000399804 SFTPCP11686 197 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 S100A2P29034 98 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 CD200P41217 278 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 ETV3LQ6ZN32 361 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 ELOVL5Q9NYP7 299 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 DUXBA0A1W2PPF3 345 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 C12orf77C9JDV5 145 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 PROB1E7EW31 1015 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 GUK1Q16774 197 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 LY6G6FQ5SQ64 297 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 ATRAIDQ6UW56 229 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 TMEM252Q8N6L7 170 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 TMEM230Q96A57 120 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 MARS2Q96GW9 593 aaKnown RBP11.89□□□□□ -0.51
SCAF4-202ENST00000399804 SLC35E1Q96K37 410 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 MMP26Q9NRE1 261 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 TLN1Q9Y490 2541 aaKnown RBP11.89□□□□□ -0.51
SCAF4-202ENST00000399804 TRAV24A0A0B4J272 114 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 TFF1P04155 84 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 IL34Q6ZMJ4 242 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 LEAP2Q969E1 77 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 ADTRPQ96IZ2 230 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 DIRC2Q96SL1 478 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 DCTN5Q9BTE1 182 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 LPAR3Q9UBY5 353 aa11.89□□□□□ -0.51
SCAF4-202ENST00000399804 SELENOHQ8IZQ5 122 aaKnown RBP11.88□□□□□ -0.51
SCAF4-202ENST00000399804 FGFRL1Q8N441 504 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 PLPPR1Q8TBJ4 325 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 MRPL30Q8TCC3 161 aaKnown RBP11.88□□□□□ -0.51
SCAF4-202ENST00000399804 ACTR3CQ9C0K3 210 aaPredicted RBP11.88□□□□□ -0.51
SCAF4-202ENST00000399804 CACFD1Q9UGQ2 172 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 NQO2P16083 231 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 CFPP27918 469 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 BSPH1Q075Z2 132 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 TBR1Q16650 682 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 NHLRC3Q5JS37 347 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 MRGPRGQ86SM5 289 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 DRAM1Q8N682 238 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 RPEQ96AT9 228 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 GPR146Q96CH1 333 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 SAT2Q96F10 170 aaPredicted RBP11.88□□□□□ -0.51
SCAF4-202ENST00000399804 GALNT14Q96FL9 552 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 CALYQ9NYX4 217 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.88□□□□□ -0.512e-7■■■□□ 16.8
SCAF4-202ENST00000399804 SCGB2A1O75556 95 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 HSD17B13Q7Z5P4 300 aaPredicted RBP11.88□□□□□ -0.51
SCAF4-202ENST00000399804 ZCCHC24Q8N2G6 241 aaKnown RBP11.88□□□□□ -0.51
SCAF4-202ENST00000399804 NANPQ8TBE9 248 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 A0A1W2PRD5 423 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 A0A1W2PRF3 423 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 A0A1W2PRM7 423 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 DLL1O00548 723 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 TIMP3P35625 211 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 TAGLN2P37802 199 aaKnown RBP11.88□□□□□ -0.51
SCAF4-202ENST00000399804 NBL1P41271 181 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 REG1BP48304 166 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 SLC35E4Q6ICL7 350 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 LRP11Q86VZ4 500 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 C1orf147Q96MC9 270 aaPredicted RBP11.88□□□□□ -0.51
SCAF4-202ENST00000399804 NRIP2Q9BQI9 281 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 PLSCR2Q9NRY7 297 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 ZNF355PQ9NSJ1 428 aa11.88□□□□□ -0.51
SCAF4-202ENST00000399804 PRUNE2Q8WUY3 3088 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 BTBD17A6NE02 478 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 ZNF503-AS2A6NEH8 195 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 MSGN1A6NI15 193 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 ZNF273Q14593 569 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 ACOT6Q3I5F7 207 aaPredicted RBP11.87□□□□□ -0.51
SCAF4-202ENST00000399804 COLCA1Q6ZS62 124 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 ABHD14AQ9BUJ0 271 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 IGKV1D-13A0A0B4J2D9 117 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 MBP02144 154 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 IGKV1-13P0DP09 117 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 HKR1P10072 659 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 SULT1A1P50225 295 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 VMA21Q3ZAQ7 101 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 BVESQ8NE79 360 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 ZCCHC14Q8WYQ9 949 aaKnown RBP11.87□□□□□ -0.51
SCAF4-202ENST00000399804 TRAV14DV4A0A0A6YYC5 116 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 IFNL4K9M1U5 179 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 SLC25A6P12236 298 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 RPS10P46783 165 aaKnown RBP11.87□□□□□ -0.51
SCAF4-202ENST00000399804 UQCC3Q6UW78 93 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 ZNF645Q8N7E2 425 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 AQP10Q96PS8 301 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms