RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 NCR2O95944 276 aa7.56□□□□□ -1.2
CACNA1C-220ENST00000399655 PPIAP62937 165 aaKnown RBP7.56□□□□□ -1.2
CACNA1C-220ENST00000399655 LINC00696Q6ZRV3 163 aa7.56□□□□□ -1.2
CACNA1C-220ENST00000399655 SHISA6Q6ZSJ9 500 aa7.56□□□□□ -1.2
CACNA1C-220ENST00000399655 NUDT8Q8WV74 236 aa7.56□□□□□ -1.2
CACNA1C-220ENST00000399655 GPR132Q9UNW8 380 aa7.56□□□□□ -1.2
CACNA1C-220ENST00000399655 SPINK8P0C7L1 97 aa7.56□□□□□ -1.2
CACNA1C-220ENST00000399655 CEACAM8P31997 349 aaPredicted RBP7.56□□□□□ -1.2
CACNA1C-220ENST00000399655 SMAD2Q15796 467 aaKnown RBP7.56□□□□□ -1.2
CACNA1C-220ENST00000399655 SCAMP4Q969E2 229 aa7.56□□□□□ -1.2
CACNA1C-220ENST00000399655 VPREB1P12018 145 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 SRIP30626 198 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 SLC23A3Q6PIS1 610 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 LAT2Q9GZY6 243 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 CXorf36Q9H7Y0 433 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 TRAV9-1A0A075B6T8 112 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 TMSB15BA0A087X1C1 80 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 H3BNC9 293 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 TNFSF14O43557 240 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 IFITM1P13164 125 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 ZIC5Q96T25 663 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 CISD1Q9NZ45 108 aaKnown RBP7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 HS3ST3B1Q9Y662 390 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 TTC28Q96AY4 2481 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 PEX11BO96011 259 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 GPX3P22352 226 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 CCL11P51671 97 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 H0YGG7 62 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 DRAM1Q8N682 238 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 ADAMTS12P58397 1594 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 VENTXO95231 258 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 IFITM2Q01629 132 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 SH2D5Q6ZV89 423 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 MUC20Q8N307 709 aaPredicted RBP7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 IL23AQ9NPF7 189 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 GAPTQ8N292 157 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 TMEM255BQ8WV15 326 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 TRAV9-2A0A087WT02 112 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 CA6P23280 308 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 LDLRAD2Q5SZI1 272 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 SAMD5Q5TGI4 173 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 BCORP1Q8N888 145 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 NT5CQ8TCD5 201 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 ISL1P61371 349 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 FAM189BP81408 668 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 CCSMST1Q4G0I0 132 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 PGLYRP4Q96LB8 373 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 CBLN1P23435 193 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 CDK5R1Q15078 307 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 C2orf82Q6UX34 121 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 GATD1Q8NB37 220 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 APOOQ9BUR5 198 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 SNHG12Q9BXW3 62 aa7.55□□□□□ -1.2
CACNA1C-220ENST00000399655 IL11P20809 199 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 CBLN2Q8IUK8 224 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 WFDC11Q8NEX6 87 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 MPTX1A8MV57 137 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 LINC00614P0C842 121 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 C1orf61Q13536 156 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 TMEM30AQ9NV96 361 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 PLXND1Q9Y4D7 1925 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 IGKV3-7A0A075B6H7 116 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 M0R082 166 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 AGAP20933 346 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 KLF9Q13886 244 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 IL17AQ16552 155 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 IGKV3D-15A0A087WSY6 115 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 SOCS3O14543 225 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 PDCD6O75340 191 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 IGKV3-15P01624 115 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 TM4SF18Q96CE8 201 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 TANC2Q9HCD6 1990 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 GZMBP10144 247 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 SRSF1Q07955 248 aaKnown RBP eCLIP7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 SLC26A1Q9H2B4 701 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 CST3P01034 146 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 DAPP51397 102 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 SOX8P57073 446 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 MRGPRX1Q96LB2 322 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 SAA1P0DJI8 122 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 RHOGP84095 191 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 TMEM91Q6ZNR0 172 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 ORMDL3Q8N138 153 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 MRPL32Q9BYC8 188 aaKnown RBP7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 TULP4Q9NRJ4 1543 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 TMEM88BA6NKF7 163 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 DUX5Q96PT3 197 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 GLRX2Q9NS18 164 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 TRBV23-1A0A0A0MS06 115 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 CRYBB2P43320 205 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 LINC00303Q3SY05 128 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 MRPS11P82912 194 aaKnown RBP7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 GATAD1Q8WUU5 269 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 MRGPRX3Q96LB0 322 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 ARHGAP21Q5T5U3 1957 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 LCN2P80188 198 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 MTFP1Q9UDX5 166 aa7.54□□□□□ -1.2
CACNA1C-220ENST00000399655 CEACAM18A8MTB9 384 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 SPRY3O43610 288 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 EIF3GO75821 320 aaKnown RBP eCLIP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms