RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 C5orf30Q96GV9 206 aa15.98■□□□□ 0.15
PDLIM2-205ENST00000397761 SUCNR1Q9BXA5 334 aa15.98■□□□□ 0.15
PDLIM2-205ENST00000397761 OR2D2Q9H210 308 aa15.98■□□□□ 0.15
PDLIM2-205ENST00000397761 IFI27L2Q9H2X8 130 aa15.98■□□□□ 0.15
PDLIM2-205ENST00000397761 BEX4Q9NWD9 120 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-205ENST00000397761 GAB2Q9UQC2 676 aa15.98■□□□□ 0.15
PDLIM2-205ENST00000397761 RBM7Q9Y580 266 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-205ENST00000397761 MAP1AP78559 2803 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-205ENST00000397761 PPIAL4CA0A0B4J2A2 164 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 PPIAL4GP0DN37 164 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 CD34P28906 385 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 RAB7AP51149 207 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 SLC9A3R2Q15599 337 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 ANKRD55Q3KP44 614 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 CT45A1Q5HYN5 189 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 TBC1D26Q86UD7 250 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 CT45A3Q8NHU0 189 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 ZNF596Q8TC21 504 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 CASTOR1Q8WTX7 329 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 PSG11Q9UQ72 335 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 KCNIP3Q9Y2W7 256 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 LOC105371242A0A075B767 164 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 ST8SIA5O15466 376 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 LIPFP07098 398 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 IGHV1-8P0DP01 117 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 NFYBP25208 207 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 S100GP29377 79 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 PAX2Q02962 417 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 TMEM187Q14656 261 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 C2orf68Q2NKX9 166 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 SLC25A48Q6ZT89 311 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 LRTM2Q8N967 370 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 GLYATL2Q8WU03 294 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 ABHD14AQ9BUJ0 271 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 RNF150Q9ULK6 438 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 KCNS2Q9ULS6 477 aa15.97■□□□□ 0.15
PDLIM2-205ENST00000397761 C3orf85A0A1B0GTC6 90 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 SLC31A2O15432 143 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 B3GALNT1O75752 331 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 OR5AC1P0C628 307 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 ANXA3P12429 323 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 F2RP25116 425 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 ERVFRD-1P60508 538 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 LRRC75A-AS1Q8N1F1 130 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 LINC00311Q8N616 119 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 COQ8AQ8NI60 647 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 MSI2Q96DH6 328 aaKnown RBP15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 TP53RKQ96S44 253 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 TMEM222Q9H0R3 208 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 MGAT4CQ9UBM8 478 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 POLR3KQ9Y2Y1 108 aaPredicted RBP15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 SESN1Q9Y6P5 492 aa15.96■□□□□ 0.14
PDLIM2-205ENST00000397761 H0Y980 276 aa15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 PROP1O75360 226 aa15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 OR2A4O95047 310 aa15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 ZFP36P26651 326 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 TCTE3Q8IZS6 198 aa15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 LEAP2Q969E1 77 aa15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 MBD6Q96DN6 1003 aa15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 ABHD14BQ96IU4 210 aa15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 OR2A7Q96R45 310 aa15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 RANGRFQ9HD47 186 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 SDHAF2Q9NX18 166 aa15.95■□□□□ 0.14
PDLIM2-205ENST00000397761 IGHV4-30-2A0A087WSY4 118 aa15.94■□□□□ 0.14
PDLIM2-205ENST00000397761 M0R1W7 72 aa15.94■□□□□ 0.14
PDLIM2-205ENST00000397761 UCP1P25874 307 aa15.94■□□□□ 0.14
PDLIM2-205ENST00000397761 CD83Q01151 205 aa15.94■□□□□ 0.14
PDLIM2-205ENST00000397761 LIAT1Q6ZQX7 453 aa15.94■□□□□ 0.14
PDLIM2-205ENST00000397761 C1orf122Q6ZSJ8 110 aa15.94■□□□□ 0.14
PDLIM2-205ENST00000397761 ODF3L1Q8IXM7 274 aa15.94■□□□□ 0.14
PDLIM2-205ENST00000397761 KIR3DL3Q8N743 410 aa15.94■□□□□ 0.14
PDLIM2-205ENST00000397761 OR5M8Q8NGP6 311 aa15.94■□□□□ 0.14
PDLIM2-205ENST00000397761 GPHA2Q96T91 129 aa15.94■□□□□ 0.14
PDLIM2-205ENST00000397761 ZNF436Q9C0F3 470 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-205ENST00000397761 IGHV4-61A0A0C4DH41 118 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 RNF212BA8MTL3 300 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 A8MV72 311 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 TNFSF12O43508 249 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 IGHV3-7P01780 117 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 DNASE1P24855 282 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 GPR12P47775 334 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 H2BFSP57053 126 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 SRPXP78539 464 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 SRSF4Q08170 494 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 DEFB113Q30KQ7 82 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 SP6Q3SY56 376 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 LIN54Q6MZP7 749 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 ZNF66Q6ZN08 573 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 UXS1Q8NBZ7 420 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 ASB13Q8WXK3 278 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 TMEM56Q96MV1 263 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 FYTTD1Q96QD9 318 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 ZNF251Q9BRH9 671 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 TMEM133Q9H2Q1 129 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 RAB18Q9NP72 206 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 FAM212BQ9NTI7 297 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 PRR13Q9NZ81 148 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 PIPOXQ9P0Z9 390 aa15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 TMEM56-RWDD3S4R434 201 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms