RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 RIMS4Q9H426 269 aaPredicted RBP16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 FAM212BQ9NTI7 297 aaPredicted RBP16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 PPIAL4EA0A075B759 164 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 PPIAL4DF5H284 164 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 SIGLEC5O15389 551 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 MBPP02686 304 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 PPIAL4FP0DN26 164 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 COL8A2P25067 703 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 LPAR6P43657 344 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 ARHGDIBP52566 201 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 HERV-K104P61576 105 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 STUMQ69YW2 141 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 NEU4Q8WWR8 484 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 PPIAL4AQ9Y536 164 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 TRAV38-1A0A0B4J264 116 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 LYNX1G3V0Z9 82 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 RNASEK-C17orf49H0YIS7 233 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 FBXO24O75426 580 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 GYPAP02724 150 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 LYNX1P0DP58 116 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 RAB5CP51148 216 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 AKR1C2P52895 323 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 SRSF3P84103 164 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 AKR1C1Q04828 323 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 HMGN3Q15651 99 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 Q6ZPA2 131 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 PLEKHF2Q9H8W4 249 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 PRELID3BQ9Y3B1 194 aa16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 LSM5Q9Y4Y9 91 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-204ENST00000397760 DYSFO75923 2080 aa16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 NDUFA2O43678 99 aa16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 CDKN1AP38936 164 aa16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 OR3A1P47881 315 aa16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 DVL1P1P54792 670 aaPredicted RBP16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 RND3P61587 244 aa16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 ZNF497Q6ZNH5 498 aa16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 FOXRED2Q8IWF2 684 aa16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 MRPL30Q8TCC3 161 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 GLYATL2Q8WU03 294 aa16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 ABHD14BQ96IU4 210 aa16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 Q9N2K0 584 aa16.09■□□□□ 0.17
PDLIM2-204ENST00000397760 SPTAN1Q13813 2472 aaKnown RBP16.08■□□□□ 0.17
PDLIM2-204ENST00000397760 ST8SIA3O43173 380 aa16.08■□□□□ 0.17
PDLIM2-204ENST00000397760 ZNF737O75373 536 aa16.08■□□□□ 0.17
PDLIM2-204ENST00000397760 CDS2O95674 445 aa16.08■□□□□ 0.17
PDLIM2-204ENST00000397760 C20orf204Q6ZNR8 217 aa16.08■□□□□ 0.17
PDLIM2-204ENST00000397760 SNX22Q96L94 193 aa16.08■□□□□ 0.17
PDLIM2-204ENST00000397760 GINS3Q9BRX5 216 aa16.08■□□□□ 0.17
PDLIM2-204ENST00000397760 TRBV6-6A0A0A6YYG2 114 aa16.08■□□□□ 0.16
PDLIM2-204ENST00000397760 RCC1P18754 421 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-204ENST00000397760 KCNJ3P48549 501 aa16.08■□□□□ 0.16
PDLIM2-204ENST00000397760 ZNF561Q8N587 486 aa16.08■□□□□ 0.16
PDLIM2-204ENST00000397760 ZNRF1Q8ND25 227 aa16.08■□□□□ 0.16
PDLIM2-204ENST00000397760 PPP1R35Q8TAP8 253 aa16.08■□□□□ 0.16
PDLIM2-204ENST00000397760 SDSLQ96GA7 329 aa16.08■□□□□ 0.16
PDLIM2-204ENST00000397760 CCL13Q99616 98 aa16.08■□□□□ 0.16
PDLIM2-204ENST00000397760 HRNRQ86YZ3 2850 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 DUXBA0A1W2PPF3 345 aa16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 LY6HO94772 140 aa16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 PPYP01298 95 aa16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 PVALBP20472 110 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 FXYD4P59646 89 aa16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 AESQ08117 197 aa16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 LYZL2Q7Z4W2 148 aa16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 GAPTQ8N292 157 aa16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 GAFA1Q96PS6 74 aa16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 ZNF665Q9H7R5 613 aa16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 STRAPQ9Y3F4 350 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-204ENST00000397760 PIGBOS1A0A0B4J2F0 54 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 TMEM30CPA0ZSE6 113 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 K7N7A8 449 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 DIRAS3O95661 229 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 CTXN2P0C2S0 81 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 DAOP14920 347 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 MRPS11P82912 194 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 SP6Q3SY56 376 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 SLC35E4Q6ICL7 350 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 ZNF880Q6PDB4 577 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 ZNF788Q6ZQV5 615 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 OR4D5Q8NGN0 318 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 SPIN2AQ99865 258 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 SPIN2BQ9BPZ2 258 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 TRAPPC2LQ9UL33 140 aa16.06■□□□□ 0.16
PDLIM2-204ENST00000397760 MPPED1O15442 326 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 SCGB1D2O95969 90 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 SPP1P10451 314 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 AADACP22760 399 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 PAX6P26367 422 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 PHLDA2Q53GA4 152 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 KRBOX4Q5JUW0 171 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 Q6ZRG5 221 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 FAM219AQ8IW50 185 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 COQ2Q96H96 371 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 TMEM56Q96MV1 263 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 KPTNQ9Y664 436 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 TMEM56-RWDD3S4R434 201 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 TRAV39A0A0B4J263 110 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 C3orf85A0A1B0GTC6 90 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 NKX6-3A6NJ46 265 aa16.05■□□□□ 0.16
PDLIM2-204ENST00000397760 MGST3O14880 152 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms