RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 UBAC2Q8NBM4 344 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 HES4Q9HCC6 221 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 SLC2A8Q9NY64 477 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 IL36RNQ9UBH0 155 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 HILPDAQ9Y5L2 63 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 ABCA4P78363 2273 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 COL5A1P20908 1838 aaPredicted RBP6.97□□□□□ -1.29
PTPRD-204ENST00000397606 KBTBD11-OT1A0A1B0GTJ5 212 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 A0A1B0GU03 582 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 E7EQL1 145 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 TXNL1O43396 289 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 TDGF1P3P51864 188 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 IFITM3Q01628 133 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 RAB32Q13637 225 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 ZNF146Q15072 292 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 THNSL2Q86YJ6 484 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 SYNGR2O43760 224 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 AGAP20933 346 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 PPOXP50336 477 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 SP5Q6BEB4 398 aaPredicted RBP6.97□□□□□ -1.29
PTPRD-204ENST00000397606 Q8NA96 180 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 OR1A1Q9P1Q5 309 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 WASHC3Q9Y3C0 194 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 IGKV1-12A0A0C4DH73 117 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 AGPAT2O15120 278 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 SIGLEC5O15389 551 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 IGKV1D-12P01611 117 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 BVESQ8NE79 360 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 OPN4Q9UHM6 478 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 WDR87Q6ZQQ6 2873 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 CST7O76096 145 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 GOSR1O95249 250 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 MPC2O95563 127 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 MBP02144 154 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 ACAA1P09110 424 aaPredicted RBP6.96□□□□□ -1.29
PTPRD-204ENST00000397606 PRSS54Q6PEW0 395 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 PNKDQ8N490 385 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 OR13A1Q8NGR1 328 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 GFI1Q99684 422 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 NMES1Q9C002 83 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 HRH4Q9H3N8 390 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 PITPNC1Q9UKF7 332 aa6.96□□□□□ -1.29
PTPRD-204ENST00000397606 LYNX1G3V0Z9 82 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 CGAP01215 116 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 LYNX1P0DP58 116 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 LCN2P80188 198 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 OR2C3Q8N628 320 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 IGKV1-27A0A075B6S5 117 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 A6NNC1 897 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 TMEM178BH3BS89 294 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 PGLYRP1O75594 196 aaPredicted RBP6.96□□□□□ -1.3
PTPRD-204ENST00000397606 HPXP02790 462 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 G6PCP35575 357 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 LGALS7P47929 136 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 UQCRFS1P47985 274 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 PEA15Q15121 130 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 DHRS7BQ6IAN0 325 aaPredicted RBP6.96□□□□□ -1.3
PTPRD-204ENST00000397606 ETV3LQ6ZN32 361 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 LYZL2Q7Z4W2 148 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 OR1L8Q8NGR8 309 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 TMEM230Q96A57 120 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 TMEM222Q9H0R3 208 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 GTF3C1Q12789 2109 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 CACNA1DQ01668 2161 aa6.96□□□□□ -1.3
PTPRD-204ENST00000397606 C7orf66A4D0T2 115 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 OPN1MWP04001 364 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 OPN1MW2P0DN77 364 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 OPN1MW3P0DN78 364 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 OPRK1P41145 380 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 BPIFB3P59826 476 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 RTN4RL2Q86UN3 420 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 MRPL30Q8TCC3 161 aaKnown RBP6.95□□□□□ -1.3
PTPRD-204ENST00000397606 RHOVQ96L33 236 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 UQCC1Q9NVA1 299 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 TRAV24A0A0B4J272 114 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 MLNRO43193 412 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 MPZP25189 248 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 ELLP55199 621 aaPredicted RBP6.95□□□□□ -1.3
PTPRD-204ENST00000397606 WDFY1Q8IWB7 410 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 BAP18Q8IXM2 172 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 ACY3Q96HD9 319 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 DMRTA2Q96SC8 542 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 PRR13Q9NZ81 148 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 RNF24Q9Y225 148 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 ZNF835Q9Y2P0 537 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 ZNF503-AS2A6NEH8 195 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 LILRA1O75019 489 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 TOX4O94842 621 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 TAS2R45P59539 299 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 POLR2GP62487 172 aaKnown RBP eCLIP6.95□□□□□ -1.3
PTPRD-204ENST00000397606 ACOT6Q3I5F7 207 aaPredicted RBP6.95□□□□□ -1.3
PTPRD-204ENST00000397606 PLPPR1Q8TBJ4 325 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 DTD1Q8TEA8 209 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 LEAP2Q969E1 77 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 UHRF2Q96PU4 802 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 PPP1R14DQ9NXH3 145 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 CEACAM18A8MTB9 384 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 FAM166AQ6J272 317 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 ZNF497Q6ZNH5 498 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 MISP3Q96FF7 219 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms