RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TAS2R31P59538 309 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 DHRS2Q13268 280 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 C11orf91Q3C1V1 193 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 Q3ZCU0 254 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 TMEM128Q5BJH2 165 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 CMTM1Q8IZ96 169 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 CADM3Q8N126 398 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 ZNF645Q8N7E2 425 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 UXS1Q8NBZ7 420 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 ZNF439Q8NDP4 499 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 C5orf30Q96GV9 206 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 PCGF1Q9BSM1 259 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 ZANQ9Y493 2812 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 PRAF2O60831 178 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 KLRD1Q13241 179 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 RPL39P5Q59GN2 51 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 PRSS57Q6UWY2 283 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 M0R1W7 72 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 SUPT4H1P63272 117 aaKnown RBP17.31■□□□□ 0.36
CPNE1-204ENST00000397443 SP6Q3SY56 376 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 VMO1Q7Z5L0 202 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 TBC1D26Q86UD7 250 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 PNKDQ8N490 385 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 OR51H1Q8NH63 302 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 ZNF486Q96H40 463 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-204ENST00000397443 ALX4Q9H161 411 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-204ENST00000397443 GHITMQ9H3K2 345 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 METTL8Q9H825 291 aaKnown RBP17.31■□□□□ 0.36
CPNE1-204ENST00000397443 GPN1Q9HCN4 374 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-204ENST00000397443 SDHAF2Q9NX18 166 aa17.31■□□□□ 0.36
CPNE1-204ENST00000397443 IGHV2-26A0A0B4J1V2 119 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 C9orf170A2RU37 121 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 SSNA1O43805 119 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 IL5P05113 134 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 ZNF16P17020 682 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-204ENST00000397443 RAB7AP51149 207 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 DVL1P1P54792 670 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-204ENST00000397443 LINC00205P59089 165 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 LIN54Q6MZP7 749 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 SLC25A48Q6ZT89 311 aaKnown RBP17.3■□□□□ 0.36
CPNE1-204ENST00000397443 LYG2Q86SG7 212 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 SGPP2Q8IWX5 399 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 CCDC71LQ8N9Z2 235 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 DRAXINQ8NBI3 349 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-204ENST00000397443 BVESQ8NE79 360 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 OR51J1Q9H342 316 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 ITGB1BP2Q9UKP3 347 aa17.3■□□□□ 0.36
CPNE1-204ENST00000397443 A0A1W2PRD5 423 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 A0A1W2PRF3 423 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 A0A1W2PRM7 423 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 CRYM-AS1A6NIL9 109 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 J3QR06 171 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 CREBL2O60519 120 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-204ENST00000397443 PGLYRP1O75594 196 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-204ENST00000397443 RBP4P02753 201 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 MSMBP08118 114 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 OR10X1Q8NGY0 326 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.29■□□□□ 0.368e-8■■■■□ 20.3
CPNE1-204ENST00000397443 SAA2-SAA4A0A096LPE2 208 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 C7orf66A4D0T2 115 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 TOR1AO14656 332 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 MPPED1O15442 326 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 SAA2P0DJI9 122 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-204ENST00000397443 S100GP29377 79 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 C1orf229Q6ZS94 237 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-204ENST00000397443 OR9G1Q8NH87 305 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 ZNF431Q8TF32 576 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-204ENST00000397443 NAA60Q9H7X0 242 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 KPTNQ9Y664 436 aa17.29■□□□□ 0.36
CPNE1-204ENST00000397443 CR1P17927 2039 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 B4DSR2 109 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 TOX4O94842 621 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 OR5AC1P0C628 307 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 BCAP31P51572 246 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 LOXL1Q08397 574 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-204ENST00000397443 ZNF626Q68DY1 528 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 FAHD2BQ6P2I3 314 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-204ENST00000397443 KIR3DL3Q8N743 410 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 FAHD2AQ96GK7 314 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 AKR1E2Q96JD6 320 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 CLEC7AQ9BXN2 247 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 SIRPDQ9H106 197 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 INSIG2Q9Y5U4 225 aa17.28■□□□□ 0.36
CPNE1-204ENST00000397443 A0A087X0M5 115 aa17.27■□□□□ 0.36
CPNE1-204ENST00000397443 A0A1B0GX30 115 aa17.27■□□□□ 0.36
CPNE1-204ENST00000397443 M0R1X1 148 aa17.27■□□□□ 0.36
CPNE1-204ENST00000397443 PRTN3P24158 256 aa17.27■□□□□ 0.36
CPNE1-204ENST00000397443 DHODHQ02127 395 aa17.27■□□□□ 0.36
CPNE1-204ENST00000397443 OR2B11Q5JQS5 317 aa17.27■□□□□ 0.36
CPNE1-204ENST00000397443 ODF3L1Q8IXM7 274 aa17.27■□□□□ 0.36
CPNE1-204ENST00000397443 POLR3KQ9Y2Y1 108 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-204ENST00000397443 ZNF469Q96JG9 3925 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-204ENST00000397443 BAHCC1Q9P281 2608 aa17.27■□□□□ 0.36
CPNE1-204ENST00000397443 MYO9AB2RTY4 2548 aa17.27■□□□□ 0.36
CPNE1-204ENST00000397443 RAB29O14966 203 aa17.27■□□□□ 0.35
CPNE1-204ENST00000397443 PROP1O75360 226 aa17.27■□□□□ 0.35
CPNE1-204ENST00000397443 SFT2D2O95562 160 aa17.27■□□□□ 0.35
CPNE1-204ENST00000397443 DCAF12L2Q5VW00 463 aa17.27■□□□□ 0.35
CPNE1-204ENST00000397443 KCTD9Q7L273 389 aa17.27■□□□□ 0.35
CPNE1-204ENST00000397443 OR13D1Q8NGV5 346 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms