RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MSMO1Q15800 293 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 SLC25A48Q6ZT89 311 aaKnown RBP22.5■■□□□ 1.19
CPNE1-203ENST00000397442 TBC1D26Q86UD7 250 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 Q8N7P7 452 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 CASTOR1Q8WTX7 329 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 MITD1Q8WV92 249 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 GALNT14Q96FL9 552 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 NEURL2Q9BR09 285 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 SESN1Q9Y6P5 492 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 PROP1O75360 226 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 TRAPPC2P0DI81 140 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 TRAPPC2BP0DI82 140 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 SLC25A16P16260 332 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 GNG10P50151 68 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 EIF4EBP1Q13541 118 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-203ENST00000397442 Q3ZCU0 254 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 DMRTB1Q96MA1 342 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 PRR13Q9NZ81 148 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 ONECUT1Q9UBC0 465 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 RAB7AP51149 207 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 DLX1P56177 255 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 ANKRD55Q3KP44 614 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 C12orf45Q8N5I9 185 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-203ENST00000397442 OR11H7Q8NGC8 314 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 MMP26Q9NRE1 261 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 SDHAF2Q9NX18 166 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 ZNRD1Q9P1U0 126 aa22.49■■□□□ 1.19
CPNE1-203ENST00000397442 POLR3KQ9Y2Y1 108 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-203ENST00000397442 A0A096LNT2 108 aa22.48■■□□□ 1.19
CPNE1-203ENST00000397442 ENSAO43768 121 aaKnown RBP22.48■■□□□ 1.19
CPNE1-203ENST00000397442 IFNA2P01563 188 aa22.48■■□□□ 1.19
CPNE1-203ENST00000397442 SULT1A3P0DMM9 295 aa22.48■■□□□ 1.19
CPNE1-203ENST00000397442 SULT1A4P0DMN0 295 aa22.48■■□□□ 1.19
CPNE1-203ENST00000397442 ARF6P62330 175 aa22.48■■□□□ 1.19
CPNE1-203ENST00000397442 ODF3L1Q8IXM7 274 aa22.48■■□□□ 1.19
CPNE1-203ENST00000397442 ZBTB34Q8NCN2 500 aa22.48■■□□□ 1.19
CPNE1-203ENST00000397442 TMEM133Q9H2Q1 129 aa22.48■■□□□ 1.19
CPNE1-203ENST00000397442 IGHV2-70DA0A0C4DH43 119 aa22.47■■□□□ 1.19
CPNE1-203ENST00000397442 M0R1W7 72 aa22.47■■□□□ 1.19
CPNE1-203ENST00000397442 FOXH1O75593 365 aa22.47■■□□□ 1.19
CPNE1-203ENST00000397442 SLC22A5O76082 557 aa22.47■■□□□ 1.19
CPNE1-203ENST00000397442 OR5AC1P0C628 307 aa22.47■■□□□ 1.19
CPNE1-203ENST00000397442 CXCL3P19876 107 aa22.47■■□□□ 1.19
CPNE1-203ENST00000397442 C2orf68Q2NKX9 166 aa22.47■■□□□ 1.19
CPNE1-203ENST00000397442 SP6Q3SY56 376 aa22.47■■□□□ 1.19
CPNE1-203ENST00000397442 C1orf229Q6ZS94 237 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-203ENST00000397442 C8orf31Q8N9H6 132 aa22.47■■□□□ 1.19
CPNE1-203ENST00000397442 ZNF596Q8TC21 504 aa22.47■■□□□ 1.19
CPNE1-203ENST00000397442 TP53RKQ96S44 253 aa22.47■■□□□ 1.19
CPNE1-203ENST00000397442 MAP1AP78559 2803 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-203ENST00000397442 HECTD1Q9ULT8 2610 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 CD34P28906 385 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 LIN54Q6MZP7 749 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 KRTAP1-3Q8IUG1 177 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 C3orf85A0A1B0GTC6 90 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 PFDN1O60925 122 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 GPR12P47775 334 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 CD300CQ08708 224 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 TMEM187Q14656 261 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 Q5PR19 223 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 KCTD9Q7L273 389 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 KIR3DL3Q8N743 410 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 GLYATL2Q8WU03 294 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 PHB2Q99623 299 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 GAB2Q9UQC2 676 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 KCNIP3Q9Y2W7 256 aa22.46■■□□□ 1.19
CPNE1-203ENST00000397442 hCG_1809904A0A1W2PP81 198 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 A0A1W2PPE2 198 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 A0A1W2PR64 198 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 A0A1W2PRV1 198 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 DBX1A6NMT0 343 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 USF1P22415 310 aaPredicted RBP22.45■■□□□ 1.18
CPNE1-203ENST00000397442 F2RP25116 425 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 S100GP29377 79 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 PRB3Q04118 309 aaPredicted RBP22.45■■□□□ 1.18
CPNE1-203ENST00000397442 BTNL3Q6UXE8 466 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 C1orf122Q6ZSJ8 110 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 ABHD12Q8N2K0 398 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 LINC00311Q8N616 119 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 UXS1Q8NBZ7 420 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 ZNF251Q9BRH9 671 aa22.45■■□□□ 1.18
CPNE1-203ENST00000397442 PDZD2O15018 2839 aa22.44■■□□□ 1.18
CPNE1-203ENST00000397442 SAA2-SAA4A0A096LPE2 208 aa22.44■■□□□ 1.18
CPNE1-203ENST00000397442 A0A0B4J2A0 478 aa22.44■■□□□ 1.18
CPNE1-203ENST00000397442 J3QR06 171 aa22.44■■□□□ 1.18
CPNE1-203ENST00000397442 SAA2P0DJI9 122 aaPredicted RBP22.44■■□□□ 1.18
CPNE1-203ENST00000397442 RPL39P5Q59GN2 51 aa22.44■■□□□ 1.18
CPNE1-203ENST00000397442 OR51H1Q8NH63 302 aa22.44■■□□□ 1.18
CPNE1-203ENST00000397442 SHPKQ9UHJ6 478 aa22.44■■□□□ 1.18
CPNE1-203ENST00000397442 LYG1Q8N1E2 194 aa22.43■■□□□ 1.18
CPNE1-203ENST00000397442 OR9G1Q8NH87 305 aa22.43■■□□□ 1.18
CPNE1-203ENST00000397442 MSI2Q96DH6 328 aaKnown RBP22.43■■□□□ 1.18
CPNE1-203ENST00000397442 METTL8Q9H825 291 aaKnown RBP22.43■■□□□ 1.18
CPNE1-203ENST00000397442 ITPR2Q14571 2701 aa22.43■■□□□ 1.18
CPNE1-203ENST00000397442 IGHV2-26A0A0B4J1V2 119 aa22.42■■□□□ 1.18
CPNE1-203ENST00000397442 RAB29O14966 203 aa22.42■■□□□ 1.18
CPNE1-203ENST00000397442 RPL30P62888 115 aaKnown RBP22.42■■□□□ 1.18
CPNE1-203ENST00000397442 C11orf88Q6PI97 169 aa22.42■■□□□ 1.18
CPNE1-203ENST00000397442 PRSS57Q6UWY2 283 aa22.42■■□□□ 1.18
CPNE1-203ENST00000397442 AKAP14Q86UN6 197 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms