RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 KCNK15Q9H427 330 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 PLSCR3Q9NRY6 295 aa11.03□□□□□ -0.64
SEC13-204ENST00000397099 NOTCH3Q9UM47 2321 aa11.02□□□□□ -0.64
SEC13-204ENST00000397099 SAA2-SAA4A0A096LPE2 208 aa11.02□□□□□ -0.65
SEC13-204ENST00000397099 OR5H14A6NHG9 310 aa11.02□□□□□ -0.65
SEC13-204ENST00000397099 TRDCB7Z8K6 153 aa11.02□□□□□ -0.65
SEC13-204ENST00000397099 RBBP9O75884 186 aa11.02□□□□□ -0.65
SEC13-204ENST00000397099 PF4P02776 101 aa11.02□□□□□ -0.65
SEC13-204ENST00000397099 SAA2P0DJI9 122 aaPredicted RBP11.02□□□□□ -0.65
SEC13-204ENST00000397099 CEACAM6P40199 344 aa11.02□□□□□ -0.65
SEC13-204ENST00000397099 KPRPQ5T749 579 aaPredicted RBP11.02□□□□□ -0.65
SEC13-204ENST00000397099 FAM53AQ6NSI3 398 aaPredicted RBP11.02□□□□□ -0.65
SEC13-204ENST00000397099 OR10R2Q8NGX6 335 aa11.02□□□□□ -0.65
SEC13-204ENST00000397099 NABP2Q9BQ15 211 aa11.02□□□□□ -0.65
SEC13-204ENST00000397099 ZNF251Q9BRH9 671 aa11.02□□□□□ -0.65
SEC13-204ENST00000397099 IFI27L2Q9H2X8 130 aa11.02□□□□□ -0.65
SEC13-204ENST00000397099 TXNL4BQ9NX01 149 aaKnown RBP11.02□□□□□ -0.65
SEC13-204ENST00000397099 KIAA1456Q9P272 454 aa11.02□□□□□ -0.65
SEC13-204ENST00000397099 A0A1W2PRX2 142 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 SH2D7A6NKC9 451 aaPredicted RBP11.01□□□□□ -0.65
SEC13-204ENST00000397099 IGF1P05019 195 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 HIST1H1DP16402 221 aaKnown RBP11.01□□□□□ -0.65
SEC13-204ENST00000397099 CD33P20138 364 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 ACTBP60709 375 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 MMDQ15546 238 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 PNLIPRP3Q17RR3 467 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 BEAN1Q3B7T3 259 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 TCTEX1D4Q5JR98 221 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 KHDC1LQ5JSQ8 128 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 PLAC9Q5JTB6 97 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 SAMD5Q5TGI4 173 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.01□□□□□ -0.65
SEC13-204ENST00000397099 NPBQ8NG41 125 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 RCC1LQ96I51 464 aaKnown RBP11.01□□□□□ -0.65
SEC13-204ENST00000397099 KCTD7Q96MP8 289 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 AGMATQ9BSE5 352 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 TOLLIPQ9H0E2 274 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 ZNF221Q9UK13 617 aa11.01□□□□□ -0.65
SEC13-204ENST00000397099 PRKDCP78527 4128 aaKnown RBP11□□□□□ -0.65
SEC13-204ENST00000397099 NBR2O15453 112 aa11□□□□□ -0.65
SEC13-204ENST00000397099 HLA-DRB1P01911 266 aa11□□□□□ -0.65
SEC13-204ENST00000397099 PRB2P02812 416 aaPredicted RBP11□□□□□ -0.65
SEC13-204ENST00000397099 ELANEP08246 267 aa11□□□□□ -0.65
SEC13-204ENST00000397099 VDAC1P21796 283 aa11□□□□□ -0.65
SEC13-204ENST00000397099 TALDO1P37837 337 aa11□□□□□ -0.65
SEC13-204ENST00000397099 OR10A3P58181 314 aa11□□□□□ -0.65
SEC13-204ENST00000397099 PITPNAQ00169 270 aa11□□□□□ -0.65
SEC13-204ENST00000397099 TAGLNQ01995 201 aaKnown RBP11□□□□□ -0.65
SEC13-204ENST00000397099 FOXE3Q13461 319 aa11□□□□□ -0.65
SEC13-204ENST00000397099 TIMM50Q3ZCQ8 353 aa11□□□□□ -0.65
SEC13-204ENST00000397099 Q6ZS49 121 aa11□□□□□ -0.65
SEC13-204ENST00000397099 NOL4LQ96MY1 436 aaPredicted RBP11□□□□□ -0.65
SEC13-204ENST00000397099 MRPL20Q9BYC9 149 aaKnown RBP11□□□□□ -0.65
SEC13-204ENST00000397099 VCX3AQ9NNX9 186 aa11□□□□□ -0.65
SEC13-204ENST00000397099 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11□□□□□ -0.65
SEC13-204ENST00000397099 ZNF107Q9UII5 783 aaPredicted RBP11□□□□□ -0.65
SEC13-204ENST00000397099 RRP15Q9Y3B9 282 aaKnown RBP11□□□□□ -0.65
SEC13-204ENST00000397099 DNAH3Q8TD57 4116 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 SHISA3A0PJX4 238 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 ZNF736B4DX44 427 aaPredicted RBP10.99□□□□□ -0.65
SEC13-204ENST00000397099 RAB27BO00194 218 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 MFNGO00587 321 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 FABP7O15540 132 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 DTYMKP23919 212 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 OR3A3P47888 321 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 F2RL1P55085 397 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 RPL23AP62750 156 aaKnown RBP10.99□□□□□ -0.65
SEC13-204ENST00000397099 CXorf66Q5JRM2 361 aaPredicted RBP10.99□□□□□ -0.65
SEC13-204ENST00000397099 Q6ZPA2 131 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 ZNF329Q86UD4 541 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 CROCCP3Q8IVE0 287 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 RNF152Q8N8N0 203 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 OR10J5Q8NHC4 309 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 HDHD3Q9BSH5 251 aaPredicted RBP10.99□□□□□ -0.65
SEC13-204ENST00000397099 C11orf54Q9H0W9 315 aaPredicted RBP10.99□□□□□ -0.65
SEC13-204ENST00000397099 ZMAT5Q9UDW3 170 aaKnown RBP10.99□□□□□ -0.65
SEC13-204ENST00000397099 GAB2Q9UQC2 676 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 WASHC3Q9Y3C0 194 aa10.99□□□□□ -0.65
SEC13-204ENST00000397099 ST8SIA5O15466 376 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 NDUFA3O95167 84 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 FCGR3AP08637 254 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 GSTP1P09211 210 aaKnown RBP10.98□□□□□ -0.65
SEC13-204ENST00000397099 SCTP09683 121 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 CTXN2P0C2S0 81 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 ARFRP1Q13795 201 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 C5orf64Q2M2E5 130 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 OXLD1Q5BKU9 147 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 LIN54Q6MZP7 749 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 OR5AN1Q8NGI8 311 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 CABLES2Q9BTV7 478 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 MCRIP2Q9BUT9 160 aaKnown RBP10.98□□□□□ -0.65
SEC13-204ENST00000397099 ATG5Q9H1Y0 275 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 DCSTAMPQ9H295 470 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 KCNK7Q9Y2U2 307 aa10.98□□□□□ -0.65
SEC13-204ENST00000397099 A0A0A6YYH2 397 aa10.97□□□□□ -0.65
SEC13-204ENST00000397099 A6NJ64 397 aa10.97□□□□□ -0.65
SEC13-204ENST00000397099 H7C2Y5 167 aa10.97□□□□□ -0.65
SEC13-204ENST00000397099 TNFAIP8O95379 198 aa10.97□□□□□ -0.65
SEC13-204ENST00000397099 IGHG4P01861 327 aa10.97□□□□□ -0.65
SEC13-204ENST00000397099 APOA2P02652 100 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms