RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 OLFM3Q96PB7 478 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 OR4K3Q96R72 315 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 GPER1Q99527 375 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 PLSCR3Q9NRY6 295 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 TMEM216Q9P0N5 145 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 RSL24D1Q9UHA3 163 aaKnown RBP3.68□□□□□ -1.82
GABPB1-204ENST00000396464 KLK13Q9UKR3 277 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 POMPQ9Y244 141 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 KLF13Q9Y2Y9 288 aaPredicted RBP3.68□□□□□ -1.82
GABPB1-204ENST00000396464 NFASCO94856 1347 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 NOS1P29475 1434 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 WDR81Q562E7 1941 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 TRPM1Q7Z4N2 1603 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 CHD2O14647 1828 aaKnown RBP3.67□□□□□ -1.82
GABPB1-204ENST00000396464 IGHV2-26A0A0B4J1V2 119 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 IFITM10A6NMD0 228 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 F8W036 122 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 TMX2-CTNND1H3BSU7 103 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 K7EPK0 472 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 ISLRO14498 428 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 BET1O15155 118 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 HMGB3O15347 200 aaKnown RBP3.67□□□□□ -1.82
GABPB1-204ENST00000396464 GYG2O15488 501 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 OR2J2O76002 312 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 IGHMP01871 453 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 BGLAPP02818 100 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 CRYBA1P05813 215 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 CCL1P22362 96 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 PHBP35232 272 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 MP68P56378 58 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 DEFA1P59665 94 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 CRADDP78560 199 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 CDK5Q00535 292 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 TCEAL5Q5H9L2 206 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 CLLU1OSQ5K130 101 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 CASC10Q5T4H9 136 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 NXNL2Q5VZ03 156 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 ATP5L2Q7Z4Y8 100 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 FAM24BQ8N5W8 94 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 OR52P1PQ8NH57 321 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 TCEAL3Q969E4 200 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 SLC25A44Q96H78 314 aaPredicted RBP3.67□□□□□ -1.82
GABPB1-204ENST00000396464 FOPNLQ96NB1 174 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 ZNF285Q96NJ3 590 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 SMIM14Q96QK8 99 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 OR7D2Q96RA2 312 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 EFCAB11Q9BUY7 163 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 FAM49BQ9NUQ9 324 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 MED29Q9NX70 200 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 NEU3Q9UQ49 428 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 WASHC3Q9Y3C0 194 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 RFNGQ9Y644 331 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 SCAF11Q99590 1463 aaKnown RBP3.67□□□□□ -1.82
GABPB1-204ENST00000396464 NEXMIFQ5QGS0 1516 aa3.67□□□□□ -1.82
GABPB1-204ENST00000396464 QRICH2Q9H0J4 1663 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 TAF1LQ8IZX4 1826 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 MYH3P11055 1940 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 DYSFO75923 2080 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 GON4LQ3T8J9 2241 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 TRAPPC13A5PLN9 417 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 KRTAP4-16G5E9R7 235 aaPredicted RBP3.66□□□□□ -1.82
GABPB1-204ENST00000396464 DNASE2O00115 360 aaPredicted RBP3.66□□□□□ -1.82
GABPB1-204ENST00000396464 PDYNP01213 254 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 IGKV3-20P01619 116 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 BPGMP07738 259 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 CKS1BP61024 79 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 GFI1BQ5VTD9 330 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 SHISA6Q6ZSJ9 500 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 Q6ZSR6 202 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 ANGPTL5Q86XS5 388 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 UMODL1-AS1Q8N2C9 162 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 OR8S1Q8NH09 359 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 TWIST2Q8WVJ9 160 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 KLK6Q92876 244 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 VSIG2Q96IQ7 327 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 ANKRD36BP1Q96IX9 119 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 ZNF436Q9C0F3 470 aaPredicted RBP3.66□□□□□ -1.82
GABPB1-204ENST00000396464 SH3BGRL3Q9H299 93 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 FGF22Q9HCT0 170 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 LYRM2Q9NU23 88 aaPredicted RBP3.66□□□□□ -1.82
GABPB1-204ENST00000396464 NEUROG3Q9Y4Z2 214 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 PTPRTO14522 1441 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 MYOM2P54296 1465 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 DIP2AQ14689 1571 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 NOTCH4Q99466 2003 aa3.66□□□□□ -1.82
GABPB1-204ENST00000396464 IGHV3OR16-10A0A075B7F0 116 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 TRAV26-2A0A0B4J265 109 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 A0A1B0GV50 99 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 OR5H1A6NKK0 313 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF705GA8MUZ8 300 aaPredicted RBP3.65□□□□□ -1.83
GABPB1-204ENST00000396464 NDUFC2-KCTD14E9PQ53 114 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 ATP6V1G2-DDX39BF2Z307 99 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 G3V2T6 193 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 K7EP13 123 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 TCF21O43680 179 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 SS18L1O75177 396 aaPredicted RBP3.65□□□□□ -1.83
GABPB1-204ENST00000396464 IGHG2P01859 326 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 SERPINE1P05121 402 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 TDGF1P13385 188 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 GPX2P18283 190 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms