RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 SNX22Q96L94 193 aa10.15□□□□□ -0.79
ITGB1-202ENST00000396033 VKORC1Q9BQB6 163 aa10.15□□□□□ -0.79
ITGB1-202ENST00000396033 DCTN5Q9BTE1 182 aa10.15□□□□□ -0.79
ITGB1-202ENST00000396033 MAGT1Q9H0U3 335 aa10.15□□□□□ -0.79
ITGB1-202ENST00000396033 PLEKHF2Q9H8W4 249 aa10.15□□□□□ -0.79
ITGB1-202ENST00000396033 CXorf66Q5JRM2 361 aaPredicted RBP10.14□□□□□ -0.79
ITGB1-202ENST00000396033 FAM201AQ5SY85 155 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 TRAT1Q6PIZ9 186 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 RFESDQ8TAC1 157 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 RNF141Q8WVD5 230 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 BSCL2Q96G97 398 aaPredicted RBP10.14□□□□□ -0.79
ITGB1-202ENST00000396033 RNF7Q9UBF6 113 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 PCNX1Q96RV3 2341 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 IGHV3-43A0A0B4J1X8 118 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 C5orf52A6NGY3 159 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 RNF212BA8MTL3 300 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 SPINT2O43291 252 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 JTBO76095 146 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 LHBP01229 141 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 GAPDHP04406 335 aaKnown RBP10.14□□□□□ -0.79
ITGB1-202ENST00000396033 IGHV3-43DP0DP04 118 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 PAX5Q02548 391 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 ZNF808Q8N4W9 903 aaPredicted RBP10.14□□□□□ -0.79
ITGB1-202ENST00000396033 GCM1Q9NP62 436 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 A0A0G2JRQ6 117 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 MGST3O14880 152 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 EIF5AL1Q6IS14 154 aaKnown RBP10.14□□□□□ -0.79
ITGB1-202ENST00000396033 SSX8Q7RTT4 187 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 ZNRF1Q8ND25 227 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 NARS2Q96I59 477 aaKnown RBP10.14□□□□□ -0.79
ITGB1-202ENST00000396033 ABHD14BQ96IU4 210 aa10.14□□□□□ -0.79
ITGB1-202ENST00000396033 SPTBN4Q9H254 2564 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 ODAMA1E959 279 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 FGF16O43320 207 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 OR4A8P0C604 315 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 CAV2P51636 162 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 CASP6P55212 293 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 VAMP2P63027 116 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 LTC4SQ16873 150 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 ADAM5Q6NVV9 412 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 GPR146Q96CH1 333 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 ICE1Q9Y2F5 2266 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 WRBO00258 174 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 ATXN7O15265 892 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-202ENST00000396033 CYB5R3P00387 301 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-202ENST00000396033 IGKV1-39P01597 117 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 IGKV1D-39P04432 117 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 SNAPINO95295 136 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 RD3LP0DJH9 198 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 EDDM3BP56851 147 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 ADIPOQQ15848 244 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 DMRTC2Q8IXT2 367 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-202ENST00000396033 OR2C3Q8N628 320 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 ZBTB34Q8NCN2 500 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 TOLLIPQ9H0E2 274 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 C11orf1Q9H5F2 150 aa10.13□□□□□ -0.79
ITGB1-202ENST00000396033 FAM24AA6NFZ4 105 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 C15orf65H3BRN8 121 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 FBXO24O75426 580 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 EWSR1Q01844 656 aaKnown RBP eCLIP10.12□□□□□ -0.79
ITGB1-202ENST00000396033 NHLH2Q02577 135 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 WFIKKN1Q96NZ8 548 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 SPTA1P02549 2419 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 BORCS7-ASMTA0A0B4J1R7 106 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 A0A1B0GU03 582 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 ZNF705EA8MWA4 302 aaPredicted RBP10.12□□□□□ -0.79
ITGB1-202ENST00000396033 DEFB108AA8MXU0 73 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 FAM157AC9JC47 383 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 K7N7A8 449 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 ID3Q02535 119 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 KLRB1Q12918 225 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 IZUMO4Q1ZYL8 232 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 ZNF585BQ52M93 769 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 C5orf30Q96GV9 206 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 IRF2P14316 349 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 UBAC2Q8NBM4 344 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 LSM10Q969L4 123 aaKnown RBP10.12□□□□□ -0.79
ITGB1-202ENST00000396033 WFDC1Q9HC57 220 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 CACNG5Q9UF02 275 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 FAM96BQ9Y3D0 163 aa10.12□□□□□ -0.79
ITGB1-202ENST00000396033 CACNA1DQ01668 2161 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 ADH4P08319 380 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 FAM157CP0CG43 387 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 SLC25A6P12236 298 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 HTD2P86397 168 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 DEFB108BQ8NET1 73 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 FAM222BQ8WU58 562 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 TSNAXQ99598 290 aaKnown RBP10.11□□□□□ -0.79
ITGB1-202ENST00000396033 NGBQ9NPG2 151 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 LYRM2Q9NU23 88 aaPredicted RBP10.11□□□□□ -0.79
ITGB1-202ENST00000396033 PLA2G2EQ9NZK7 142 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 LPAR3Q9UBY5 353 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 CARHSP1Q9Y2V2 147 aaKnown RBP10.11□□□□□ -0.79
ITGB1-202ENST00000396033 IGSF23A1L1A6 192 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 ST8SIA5O15466 376 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 PPIHO43447 177 aaKnown RBP10.11□□□□□ -0.79
ITGB1-202ENST00000396033 IGKV1-5P01602 117 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 GZMHP20718 246 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 CCL8P80075 99 aa10.11□□□□□ -0.79
ITGB1-202ENST00000396033 CATR1Q13166 79 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms