RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 FAM25CB3EWG5 89 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 FAM25GB3EWG6 89 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 SOX6P35712 828 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 HES1Q14469 280 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 HNF4GQ14541 408 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 RPL39P5Q59GN2 51 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 OR4F5Q8NH21 305 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 OR10J5Q8NHC4 309 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 AGMATQ9BSE5 352 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 RBM38Q9H0Z9 239 aaKnown RBP15.94■□□□□ 0.14
SNCA-203ENST00000394986 CCDC59Q9P031 241 aaKnown RBP15.94■□□□□ 0.14
SNCA-203ENST00000394986 MRPS7Q9Y2R9 242 aaKnown RBP15.94■□□□□ 0.14
SNCA-203ENST00000394986 SIGLEC9Q9Y336 463 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 IGKV1D-33P01593 117 aa15.93■□□□□ 0.14
SNCA-203ENST00000394986 IGKV1-33P01594 117 aa15.93■□□□□ 0.14
SNCA-203ENST00000394986 HABP2Q14520 560 aaPredicted RBP15.93■□□□□ 0.14
SNCA-203ENST00000394986 ZNF833PQ6ZTB9 187 aa15.93■□□□□ 0.14
SNCA-203ENST00000394986 LINC01006Q8NI28 216 aa15.93■□□□□ 0.14
SNCA-203ENST00000394986 EDARADDQ8WWZ3 215 aa15.93■□□□□ 0.14
SNCA-203ENST00000394986 CMTM3Q96MX0 182 aa15.93■□□□□ 0.14
SNCA-203ENST00000394986 ZNF251Q9BRH9 671 aa15.93■□□□□ 0.14
SNCA-203ENST00000394986 GINS4Q9BRT9 223 aa15.93■□□□□ 0.14
SNCA-203ENST00000394986 SLC25A33Q9BSK2 321 aa15.93■□□□□ 0.14
SNCA-203ENST00000394986 MIXL1Q9H2W2 232 aa15.93■□□□□ 0.14
SNCA-203ENST00000394986 LANCL1O43813 399 aa15.92■□□□□ 0.14
SNCA-203ENST00000394986 HLA-DQB1P01920 261 aa15.92■□□□□ 0.14
SNCA-203ENST00000394986 FAM106CPP0CH98 169 aa15.92■□□□□ 0.14
SNCA-203ENST00000394986 BEST4Q8NFU0 473 aa15.92■□□□□ 0.14
SNCA-203ENST00000394986 NPFFR1Q9GZQ6 430 aa15.92■□□□□ 0.14
SNCA-203ENST00000394986 ANXA10Q9UJ72 324 aa15.92■□□□□ 0.14
SNCA-203ENST00000394986 SH2D7A6NKC9 451 aaPredicted RBP15.91■□□□□ 0.14
SNCA-203ENST00000394986 CTDSP2O14595 271 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 ITGB1BP1O14713 200 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 TXNL1O43396 289 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 TSPAN9O75954 239 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 LPLP06858 475 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 TMEM11P17152 192 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 Q6ZS46 218 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 HOGA1Q86XE5 327 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 THNSL2Q86YJ6 484 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 SNX29P2Q8IUI4 249 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 LAX1Q8IWV1 398 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 OR4C13Q8NGP0 309 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 SNAPC3Q92966 411 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 RBM14Q96PK6 669 aaKnown RBP15.91■□□□□ 0.14
SNCA-203ENST00000394986 NABP2Q9BQ15 211 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 TOLLIPQ9H0E2 274 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 ZNF702PQ9H963 129 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 BEX1Q9HBH7 125 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 PIPOXQ9P0Z9 390 aa15.91■□□□□ 0.14
SNCA-203ENST00000394986 SMIM31A0A1B0GVY4 71 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 CLPSL1A2RUU4 121 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 RAB29O14966 203 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 RGS5O15539 181 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 OR2F2O95006 317 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 DIRAS3O95661 229 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 OR8U9P0C7N5 309 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 BLCAPP62952 87 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 LSAMPQ13449 338 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 CNIH2Q6PI25 160 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 H1FOOQ8IZA3 346 aaPredicted RBP15.9■□□□□ 0.14
SNCA-203ENST00000394986 OR8U1Q8NH10 309 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 C16orf95Q9H693 158 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 EXTL2Q9UBQ6 330 aa15.9■□□□□ 0.14
SNCA-203ENST00000394986 ANK2Q01484 3957 aa15.89■□□□□ 0.13
SNCA-203ENST00000394986 J3QRK9 145 aa15.89■□□□□ 0.13
SNCA-203ENST00000394986 NFYAP23511 347 aaPredicted RBP15.89■□□□□ 0.13
SNCA-203ENST00000394986 PRSS3P35030 304 aa15.89■□□□□ 0.13
SNCA-203ENST00000394986 GPR12P47775 334 aa15.89■□□□□ 0.13
SNCA-203ENST00000394986 ARPC4P59998 168 aa15.89■□□□□ 0.13
SNCA-203ENST00000394986 GLDNQ6ZMI3 551 aaPredicted RBP15.89■□□□□ 0.13
SNCA-203ENST00000394986 C3orf56Q8N813 242 aa15.89■□□□□ 0.13
SNCA-203ENST00000394986 EAF1Q96JC9 268 aaPredicted RBP15.89■□□□□ 0.13
SNCA-203ENST00000394986 S1PR3Q99500 378 aa15.89■□□□□ 0.13
SNCA-203ENST00000394986 SLIRPQ9GZT3 109 aaKnown RBP15.89■□□□□ 0.13
SNCA-203ENST00000394986 OR2D2Q9H210 308 aa15.89■□□□□ 0.13
SNCA-203ENST00000394986 IFT46Q9NQC8 304 aa15.89■□□□□ 0.13
SNCA-203ENST00000394986 RSL24D1Q9UHA3 163 aaKnown RBP15.89■□□□□ 0.13
SNCA-203ENST00000394986 MMP24Q9Y5R2 645 aa15.89■□□□□ 0.13
SNCA-203ENST00000394986 PROP1O75360 226 aa15.88■□□□□ 0.13
SNCA-203ENST00000394986 AMY1AP04745 511 aa15.88■□□□□ 0.13
SNCA-203ENST00000394986 AMY2AP04746 511 aa15.88■□□□□ 0.13
SNCA-203ENST00000394986 CD1BP29016 333 aa15.88■□□□□ 0.13
SNCA-203ENST00000394986 CBX5P45973 191 aa15.88■□□□□ 0.13
SNCA-203ENST00000394986 LINC00205P59089 165 aa15.88■□□□□ 0.13
SNCA-203ENST00000394986 DRAXINQ8NBI3 349 aaPredicted RBP15.88■□□□□ 0.13
SNCA-203ENST00000394986 C5orf30Q96GV9 206 aa15.88■□□□□ 0.13
SNCA-203ENST00000394986 DCUN1D5Q9BTE7 237 aa15.88■□□□□ 0.13
SNCA-203ENST00000394986 RANBP3Q9H6Z4 567 aaPredicted RBP15.88■□□□□ 0.13
SNCA-203ENST00000394986 ZNF221Q9UK13 617 aa15.88■□□□□ 0.13
SNCA-203ENST00000394986 RNF114Q9Y508 228 aa15.88■□□□□ 0.13
SNCA-203ENST00000394986 CTXN2P0C2S0 81 aa15.87■□□□□ 0.13
SNCA-203ENST00000394986 CT45A6P0DMU7 189 aa15.87■□□□□ 0.13
SNCA-203ENST00000394986 CT45A5P0DMU8 189 aa15.87■□□□□ 0.13
SNCA-203ENST00000394986 CT45A7P0DMV0 189 aa15.87■□□□□ 0.13
SNCA-203ENST00000394986 EBI3Q14213 229 aa15.87■□□□□ 0.13
SNCA-203ENST00000394986 TMEM95Q3KNT9 176 aa15.87■□□□□ 0.13
SNCA-203ENST00000394986 ABCA11PQ4W5N1 156 aa15.87■□□□□ 0.13
SNCA-203ENST00000394986 RNASE12Q5GAN4 147 aaKnown RBP15.87■□□□□ 0.13
SNCA-203ENST00000394986 FAM71F2Q6NXP2 309 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms