RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 CACNA1DQ01668 2161 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST1H2BKO60814 126 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 OR2H2O95918 312 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 TRGC2P03986 189 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST1H2BJP06899 126 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST1H1BP16401 226 aaKnown RBP10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST1H2BOP23527 126 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST1H2BBP33778 126 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 CDX1P47902 265 aaPredicted RBP10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST1H2BDP58876 126 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST1H2BCP62807 126 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST2H2BEQ16778 126 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST1H2BHQ93079 126 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 LSM10Q969L4 123 aaKnown RBP10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST1H2BNQ99877 126 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 HIST1H2BMQ99879 126 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 OR14J1Q9UGF5 321 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 TRAPPC2LQ9UL33 140 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 DSPP15924 2871 aaKnown RBP10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 USF3Q68DE3 2245 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 BCL2P10415 239 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 SPANXN5Q5MJ07 72 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 MDP1Q86V88 176 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 LRP11Q86VZ4 500 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 MCEMP1Q8IX19 187 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 RCC1LQ96I51 464 aaKnown RBP10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 PKIBQ9C010 78 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 SIRT7Q9NRC8 400 aa10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 GAR1Q9NY12 217 aaKnown RBP10.56□□□□□ -0.72
PPP3CB-204ENST00000394829 ASPMQ8IZT6 3477 aa10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 A0A1W2PNU3 283 aaPredicted RBP10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 CDX4O14627 284 aaPredicted RBP10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 SOD3P08294 240 aa10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 SELEP16581 610 aa10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 CISD1Q9NZ45 108 aaKnown RBP10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 J3QT63 122 aa10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 PHOX2AO14813 284 aa10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 CEACAM6P40199 344 aa10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 ANKRD39Q53RE8 183 aa10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 ZNF497Q6ZNH5 498 aa10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 SCCPDHQ8NBX0 429 aa10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 OR10G4Q8NGN3 311 aa10.55□□□□□ -0.72
PPP3CB-204ENST00000394829 NPIPB11E5RHQ5 1161 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 CELA3BP08861 270 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 FABP4P15090 132 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 ELLP55199 621 aaPredicted RBP10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 LRRC75BQ2VPJ9 315 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 DCAF10Q5QP82 559 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 FAM53AQ6NSI3 398 aaPredicted RBP10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 OR4C12Q96R67 309 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 CD59P13987 128 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 MDH2P40926 338 aaKnown RBP10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 ERVS71-1P61550 626 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 ALKBH6Q3KRA9 238 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 DRAM1Q8N682 238 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 MBD3L1Q8WWY6 194 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 GP6Q9HCN6 339 aa10.54□□□□□ -0.72
PPP3CB-204ENST00000394829 CDIPTO14735 213 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 WNT2P09544 360 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 CEBPDP49716 269 aaPredicted RBP10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 HOXA4Q00056 320 aaPredicted RBP10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 TLE1Q04724 770 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 FGFRL1Q8N441 504 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 BCL2L2Q92843 193 aaPredicted RBP10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 PSMG3Q9BT73 122 aaPredicted RBP10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 WDR61Q9GZS3 305 aaKnown RBP10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 TMEM9BQ9NQ34 198 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 UBE2L5PA0A1B0GUS4 154 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 A6NNC1 897 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 GNG10P50151 68 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 MEOX1P50221 254 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 NUTF2P61970 127 aaKnown RBP10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 HBG1P69891 147 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 HBG2P69892 147 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 ABHD5Q8WTS1 349 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 ZPBPQ9BS86 351 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 STRADBQ9C0K7 418 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 OR2J1Q9GZK6 312 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 LIN7CQ9NUP9 197 aaKnown RBP10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 RNF150Q9ULK6 438 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 CEBPZOSA8MTT3 80 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 RAMP3O60896 148 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 ZNF25P17030 456 aaPredicted RBP10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 C4orf17Q53FE4 359 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 OR8G2PQ6IF36 304 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 ARL6IP6Q8N6S5 226 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 FRZBQ92765 325 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 FAM210BQ96KR6 192 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 RTL8AQ9BWD3 113 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 DEFB127Q9H1M4 99 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 RBKSQ9H477 322 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 ZNF318Q5VUA4 2279 aa10.53□□□□□ -0.72
PPP3CB-204ENST00000394829 LRP5LA4QPB2 252 aa10.52□□□□□ -0.72
PPP3CB-204ENST00000394829 B4DEV8 164 aa10.52□□□□□ -0.72
PPP3CB-204ENST00000394829 HMGB3O15347 200 aaKnown RBP10.52□□□□□ -0.72
PPP3CB-204ENST00000394829 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.72
PPP3CB-204ENST00000394829 IGKV1D-33P01593 117 aa10.52□□□□□ -0.72
PPP3CB-204ENST00000394829 IGKV1-33P01594 117 aa10.52□□□□□ -0.72
PPP3CB-204ENST00000394829 NPSP0C0P6 89 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms