RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SPSB1Q96BD6 273 aa4.92□□□□□ -1.62
RFFL-202ENST00000394597 PINX1Q96BK5 328 aaKnown RBP4.92□□□□□ -1.62
RFFL-202ENST00000394597 RNF2Q99496 336 aa4.92□□□□□ -1.62
RFFL-202ENST00000394597 LPAR5Q9H1C0 372 aa4.92□□□□□ -1.62
RFFL-202ENST00000394597 ZNF665Q9H7R5 613 aa4.92□□□□□ -1.62
RFFL-202ENST00000394597 DNAH12Q6ZR08 3092 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 HEATR5AQ86XA9 2040 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 GRIFINA4D1Z8 144 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 H3BMH7 237 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 ZNF207O43670 478 aaKnown RBP4.91□□□□□ -1.62
RFFL-202ENST00000394597 IAPPP10997 89 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 P2RY6Q15077 328 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 HIST3H3Q16695 136 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 ZNF718Q3SXZ3 478 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 ANKRD39Q53RE8 183 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 TMEM108Q6UXF1 575 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 MRGPRGQ86SM5 289 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 ZDHHC23Q8IYP9 409 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 FDCSPQ8NFU4 85 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 ASB5Q8WWX0 329 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 GMPPAQ96IJ6 420 aaPredicted RBP4.91□□□□□ -1.62
RFFL-202ENST00000394597 PARLQ9H300 379 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 AURKAIP1Q9NWT8 199 aaPredicted RBP4.91□□□□□ -1.62
RFFL-202ENST00000394597 SDK2Q58EX2 2172 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 KIAA1549LQ6ZVL6 1849 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 TRGV8A0A0C4DH27 118 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 SOCS1O15524 211 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 CA11O75493 328 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 NXPH2O95156 264 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 GRPP07492 148 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 SUCLG1P53597 346 aaKnown RBP4.91□□□□□ -1.62
RFFL-202ENST00000394597 UCNP55089 124 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 HLA-DRB5Q30154 266 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 FBXW9Q5XUX1 488 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 BRICD5Q6PL45 260 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 POC1AQ8NBT0 407 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 SRXN1Q9BYN0 137 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 OR2H1Q9GZK4 316 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 C5orf66Q9H5L9 145 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 NAA60Q9H7X0 242 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 DIDO1Q9BTC0 2240 aaKnown RBP4.91□□□□□ -1.62
RFFL-202ENST00000394597 TRBV5-5A0A0J9YX44 114 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 SERPINE3A8MV23 424 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 TRDCB7Z8K6 153 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 C17orf112F2Z3M2 114 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 M0R1B8 84 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 KIR3DL2P43630 455 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 KISS1Q15726 138 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 TEX38Q6PEX7 206 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 PET117Q6UWS5 81 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 H1FOOQ8IZA3 346 aaPredicted RBP4.91□□□□□ -1.62
RFFL-202ENST00000394597 OR51H1Q8NH63 302 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 OR2AE1Q8NHA4 323 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 SGMS2Q8NHU3 365 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 IL1F10Q8WWZ1 152 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 NEIL1Q96FI4 390 aaPredicted RBP4.91□□□□□ -1.62
RFFL-202ENST00000394597 AMELYQ99218 206 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 MANBALQ9NQG1 85 aa4.91□□□□□ -1.62
RFFL-202ENST00000394597 SNRNP200O75643 2136 aaKnown RBP4.91□□□□□ -1.62
RFFL-202ENST00000394597 FBLL1A6NHQ2 334 aaKnown RBP4.9□□□□□ -1.62
RFFL-202ENST00000394597 J3QRE1 110 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 LYZL6O75951 148 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 GYPAP02724 150 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 CTSDP07339 412 aaPredicted RBP4.9□□□□□ -1.62
RFFL-202ENST00000394597 PLP1P60201 277 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 TMEM267Q0VDI3 215 aaPredicted RBP4.9□□□□□ -1.62
RFFL-202ENST00000394597 SCGB2A2Q13296 93 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 OR11L1Q8NGX0 322 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 MRPL30Q8TCC3 161 aaKnown RBP4.9□□□□□ -1.62
RFFL-202ENST00000394597 C10orf35Q96D05 121 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 SLC25A22Q9H936 323 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 DYNLRB1Q9NP97 96 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 POLDIP2Q9Y2S7 368 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 CACNA1HO95180 2353 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 AHRRA9YTQ3 701 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 HSD17B6O14756 317 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 DEGS1O15121 323 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 MELTFP08582 738 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 VSIG8P0DPA2 414 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 COX5AP20674 150 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 RSPO4Q2I0M5 234 aaPredicted RBP4.9□□□□□ -1.62
RFFL-202ENST00000394597 ZNF260Q3ZCT1 412 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 Q56UQ5 140 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 MOB1BQ7L9L4 216 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 LSRQ86X29 649 aaPredicted RBP4.9□□□□□ -1.62
RFFL-202ENST00000394597 ATOH7Q8N100 152 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 PRR18Q8N4B5 295 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 ABHD5Q8WTS1 349 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 ZNRF4Q8WWF5 429 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 RAB9BQ9NP90 201 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 SLC7A10Q9NS82 523 aa4.9□□□□□ -1.62
RFFL-202ENST00000394597 MUC22E2RYF6 1773 aaPredicted RBP4.9□□□□□ -1.63
RFFL-202ENST00000394597 POLEQ07864 2286 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 A0A0G2JMM0 328 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 A0A1W2PPB8 328 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 A0A1W2PR80 420 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 A0A1W2PRS3 328 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 KIR3DP1A8MWS1 328 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 ZNF732B4DXR9 585 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 ADAM20O43506 726 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms