RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CCL8P80075 99 aa12.56□□□□□ -0.4
GPC3-202ENST00000394299 TNFAIP6P98066 277 aaPredicted RBP12.56□□□□□ -0.4
GPC3-202ENST00000394299 BSPH1Q075Z2 132 aa12.56□□□□□ -0.4
GPC3-202ENST00000394299 C3orf36Q3SXR2 165 aa12.56□□□□□ -0.4
GPC3-202ENST00000394299 FGFRL1Q8N441 504 aa12.56□□□□□ -0.4
GPC3-202ENST00000394299 ZNF645Q8N7E2 425 aa12.56□□□□□ -0.4
GPC3-202ENST00000394299 NINJ1Q92982 152 aa12.56□□□□□ -0.4
GPC3-202ENST00000394299 ARV1Q9H2C2 271 aa12.56□□□□□ -0.4
GPC3-202ENST00000394299 LYRM2Q9NU23 88 aaPredicted RBP12.56□□□□□ -0.4
GPC3-202ENST00000394299 NUP50Q9UKX7 468 aa12.56□□□□□ -0.4
GPC3-202ENST00000394299 C17orf98A8MV24 154 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 IAPPP10997 89 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 Q6ZRG5 221 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 OR5C1Q8NGR4 320 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 ODAMA1E959 279 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 KRASP01116 189 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 PVALBP20472 110 aaPredicted RBP12.55□□□□□ -0.4
GPC3-202ENST00000394299 G6PCP35575 357 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 CFHR2P36980 270 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 DYNLT3P51808 116 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 DEFA5Q01523 94 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 ADAM5Q6NVV9 412 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 OR10Z1Q8NGY1 313 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 LURAP1Q96LR2 239 aa12.55□□□□□ -0.4
GPC3-202ENST00000394299 BORCS7-ASMTA0A0B4J1R7 106 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 A0A1B0GU03 582 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 LINC00473A8K010 186 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 ADCYAP1P18509 176 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 EIF5AL1Q6IS14 154 aaKnown RBP12.54□□□□□ -0.4
GPC3-202ENST00000394299 TMEM108Q6UXF1 575 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 LEAP2Q969E1 77 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 WFIKKN1Q96NZ8 548 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 GINS3Q9BRX5 216 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 A0A1B0GV50 99 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 TRIM77I1YAP6 450 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 PROP1O75360 226 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 CTRB1P17538 263 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 SELENOVP59797 346 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 TMEM267Q0VDI3 215 aaPredicted RBP12.54□□□□□ -0.4
GPC3-202ENST00000394299 EIF4EBP1Q13541 118 aaPredicted RBP12.54□□□□□ -0.4
GPC3-202ENST00000394299 CTRB2Q6GPI1 263 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 FAM90A1Q86YD7 464 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 NEUROG1Q92886 237 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 SNX22Q96L94 193 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 AGMATQ9BSE5 352 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 ABHD14AQ9BUJ0 271 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 LIN7CQ9NUP9 197 aaKnown RBP12.54□□□□□ -0.4
GPC3-202ENST00000394299 JKAMPQ9P055 326 aa12.54□□□□□ -0.4
GPC3-202ENST00000394299 POLEQ07864 2286 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 TMEM218A2RU14 115 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 RAB19A4D1S5 217 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 K7N7A8 449 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 F12P00748 615 aaPredicted RBP12.53□□□□□ -0.4
GPC3-202ENST00000394299 OR4A8P0C604 315 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 SPP1P10451 314 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 ZNF134P52741 427 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 PJVKQ0ZLH3 352 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 ADIPOQQ15848 244 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 Q3ZCU0 254 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 BTNL8Q6UX41 500 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 TCTEX1D2Q8WW35 142 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 SAT2Q96F10 170 aaPredicted RBP12.53□□□□□ -0.4
GPC3-202ENST00000394299 CCL13Q99616 98 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 TREM1Q9NP99 234 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 MMP26Q9NRE1 261 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 ELOVL5Q9NYP7 299 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 CHD8Q9HCK8 2581 aa12.53□□□□□ -0.4
GPC3-202ENST00000394299 TRGV8A0A0C4DH27 118 aa12.52□□□□□ -0.4
GPC3-202ENST00000394299 A0A1W2PPE3 182 aa12.52□□□□□ -0.4
GPC3-202ENST00000394299 MGST3O14880 152 aa12.52□□□□□ -0.4
GPC3-202ENST00000394299 SPINT2O43291 252 aa12.52□□□□□ -0.4
GPC3-202ENST00000394299 S1PR2O95136 353 aa12.52□□□□□ -0.4
GPC3-202ENST00000394299 GYPAP02724 150 aa12.52□□□□□ -0.4
GPC3-202ENST00000394299 RPS23P62266 143 aaKnown RBP12.52□□□□□ -0.4
GPC3-202ENST00000394299 RUNX1Q01196 453 aa12.52□□□□□ -0.4
GPC3-202ENST00000394299 TAGLNQ01995 201 aaKnown RBP12.52□□□□□ -0.4
GPC3-202ENST00000394299 TMEM182Q6ZP80 229 aaPredicted RBP12.52□□□□□ -0.4
GPC3-202ENST00000394299 SPAG16Q8N0X2 631 aa12.52□□□□□ -0.4
GPC3-202ENST00000394299 LRRC46Q96FV0 321 aa12.52□□□□□ -0.4
GPC3-202ENST00000394299 RNF7Q9UBF6 113 aa12.52□□□□□ -0.4
GPC3-202ENST00000394299 C9JQL5 133 aa12.52□□□□□ -0.41
GPC3-202ENST00000394299 TXNL1O43396 289 aa12.52□□□□□ -0.41
GPC3-202ENST00000394299 WNT2P09544 360 aa12.52□□□□□ -0.41
GPC3-202ENST00000394299 MUC1P15941 1255 aaPredicted RBP12.52□□□□□ -0.41
GPC3-202ENST00000394299 LSM10Q969L4 123 aaKnown RBP12.52□□□□□ -0.41
GPC3-202ENST00000394299 FAM234AQ9H0X4 552 aa12.52□□□□□ -0.41
GPC3-202ENST00000394299 GNG12Q9UBI6 72 aa12.52□□□□□ -0.41
GPC3-202ENST00000394299 IL19Q9UHD0 177 aa12.52□□□□□ -0.41
GPC3-202ENST00000394299 CLDN1O95832 211 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 PTAFRP25105 342 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 ATP6V0CP27449 155 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 ERVFRD-1P60508 538 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 ZNF616Q08AN1 781 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 C1orf229Q6ZS94 237 aaPredicted RBP12.51□□□□□ -0.41
GPC3-202ENST00000394299 FAM216BQ8N7L0 139 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 TOLLIPQ9H0E2 274 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 KCNJ16Q9NPI9 418 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 SYNGR2O43760 224 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 SEC11BP0C7V7 166 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 DANCRP0C864 163 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms