RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 ZNF439Q8NDP4 499 aa16.7■□□□□ 0.26
HDDC3-202ENST00000394272 OR11H4Q8NGC9 324 aa16.7■□□□□ 0.26
HDDC3-202ENST00000394272 C18orf12Q96KH6 178 aa16.7■□□□□ 0.26
HDDC3-202ENST00000394272 TMEM56Q96MV1 263 aa16.7■□□□□ 0.26
HDDC3-202ENST00000394272 TMEM56-RWDD3S4R434 201 aa16.7■□□□□ 0.26
HDDC3-202ENST00000394272 TACC2O95359 2948 aa16.7■□□□□ 0.26
HDDC3-202ENST00000394272 MPTX1A8MV57 137 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 FAM25EA8MYX2 175 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 HOXB5P09067 269 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 DNASE1P24855 282 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 NFYBP25208 207 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 ERVFRD-1P60508 538 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 GSG1LQ6UXU4 331 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 ZNF525Q8N782 197 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 OR51H1Q8NH63 302 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 C8orf46Q8TAG6 207 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 LEAP2Q969E1 77 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 SEC22AQ96IW7 307 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 HYLS1Q96M11 299 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 PDCD10Q9BUL8 212 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 IFI27L2Q9H2X8 130 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 SDHAF2Q9NX18 166 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 SLC31A2O15432 143 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 B3GALNT1O75752 331 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 CDS2O95674 445 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 IGHV3-7P01780 117 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 SRPXP78539 464 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 ABHD14AQ9BUJ0 271 aa16.69■□□□□ 0.26
HDDC3-202ENST00000394272 METTL8Q9H825 291 aaKnown RBP16.69■□□□□ 0.26
HDDC3-202ENST00000394272 C5orf51A6NDU8 294 aa16.68■□□□□ 0.26
HDDC3-202ENST00000394272 CT45A1Q5HYN5 189 aa16.68■□□□□ 0.26
HDDC3-202ENST00000394272 C11orf42Q8N5U0 333 aa16.68■□□□□ 0.26
HDDC3-202ENST00000394272 CT45A3Q8NHU0 189 aa16.68■□□□□ 0.26
HDDC3-202ENST00000394272 OR10C1Q96KK4 312 aa16.68■□□□□ 0.26
HDDC3-202ENST00000394272 TENM4Q6N022 2769 aa16.68■□□□□ 0.26
HDDC3-202ENST00000394272 C13orf42A0A1B0GVH6 325 aa16.67■□□□□ 0.26
HDDC3-202ENST00000394272 PROP1O75360 226 aa16.67■□□□□ 0.26
HDDC3-202ENST00000394272 RAB7AP51149 207 aa16.67■□□□□ 0.26
HDDC3-202ENST00000394272 LYZL2Q7Z4W2 148 aa16.67■□□□□ 0.26
HDDC3-202ENST00000394272 DRAXINQ8NBI3 349 aaPredicted RBP16.67■□□□□ 0.26
HDDC3-202ENST00000394272 NMES1Q9C002 83 aa16.67■□□□□ 0.26
HDDC3-202ENST00000394272 LIN7CQ9NUP9 197 aaKnown RBP16.67■□□□□ 0.26
HDDC3-202ENST00000394272 GPR12P47775 334 aa16.67■□□□□ 0.26
HDDC3-202ENST00000394272 TMEM268Q5VZI3 342 aa16.67■□□□□ 0.26
HDDC3-202ENST00000394272 GGNBP1Q5YKI7 109 aa16.67■□□□□ 0.26
HDDC3-202ENST00000394272 NARFLQ9H6Q4 476 aa16.67■□□□□ 0.26
HDDC3-202ENST00000394272 GAB2Q9UQC2 676 aa16.67■□□□□ 0.26
HDDC3-202ENST00000394272 RNF212BA8MTL3 300 aa16.66■□□□□ 0.26
HDDC3-202ENST00000394272 C17orf98A8MV24 154 aa16.66■□□□□ 0.26
HDDC3-202ENST00000394272 RPL30P62888 115 aaKnown RBP16.66■□□□□ 0.26
HDDC3-202ENST00000394272 SELENOHQ8IZQ5 122 aaKnown RBP16.66■□□□□ 0.26
HDDC3-202ENST00000394272 SLC35G3Q8N808 338 aa16.66■□□□□ 0.26
HDDC3-202ENST00000394272 LY6G5BQ8NDX9 201 aa16.66■□□□□ 0.26
HDDC3-202ENST00000394272 IL22RA2Q969J5 263 aa16.66■□□□□ 0.26
HDDC3-202ENST00000394272 ARHGAP32A7KAX9 2087 aa16.66■□□□□ 0.26
HDDC3-202ENST00000394272 DOPEY2Q9Y3R5 2298 aa16.66■□□□□ 0.26
HDDC3-202ENST00000394272 VPS13CQ709C8 3753 aa16.66■□□□□ 0.26
HDDC3-202ENST00000394272 A0A1W2PPE3 182 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 IFNA21P01568 189 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 COL8A1P27658 744 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 GNB2P62879 340 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 Q3ZCU0 254 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 BTNL3Q6UXE8 466 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 ZNF66Q6ZN08 573 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 SLC25A48Q6ZT89 311 aaKnown RBP16.65■□□□□ 0.26
HDDC3-202ENST00000394272 ZNF695Q8IW36 515 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 ODF3L1Q8IXM7 274 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 PPP1R1CQ8WVI7 109 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 C2orf50Q96LR7 162 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 BPESC1Q9GZL8 116 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 TMED3Q9Y3Q3 217 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 A0A087X0M5 115 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 TRAV14DV4A0A0A6YYC5 116 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 A0A1B0GX30 115 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 C22orf46C9J442 243 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 FBN2P35556 2912 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 PDLIM4P50479 330 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 CYCSP99999 105 aaKnown RBP16.65■□□□□ 0.26
HDDC3-202ENST00000394272 IL15RAQ13261 267 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 ZNF585BQ52M93 769 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 RBPMSQ93062 196 aaKnown RBP16.65■□□□□ 0.26
HDDC3-202ENST00000394272 RAB39BQ96DA2 213 aa16.65■□□□□ 0.26
HDDC3-202ENST00000394272 HSD17B10Q99714 261 aaKnown RBP16.65■□□□□ 0.26
HDDC3-202ENST00000394272 SSBP3Q9BWW4 388 aaPredicted RBP16.65■□□□□ 0.26
HDDC3-202ENST00000394272 PPIAL4CA0A0B4J2A2 164 aa16.64■□□□□ 0.25
HDDC3-202ENST00000394272 DUXBA0A1W2PPF3 345 aa16.64■□□□□ 0.25
HDDC3-202ENST00000394272 PPIAL4GP0DN37 164 aa16.64■□□□□ 0.25
HDDC3-202ENST00000394272 IGHV1-8P0DP01 117 aa16.64■□□□□ 0.25
HDDC3-202ENST00000394272 GNG10P50151 68 aa16.64■□□□□ 0.25
HDDC3-202ENST00000394272 ASH1LQ9NR48 2969 aaKnown RBP16.64■□□□□ 0.25
HDDC3-202ENST00000394272 LINC00473A8K010 186 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 IGHV2-5P01817 119 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 SERPINE2P07093 398 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 DUTP33316 252 aaKnown RBP16.63■□□□□ 0.25
HDDC3-202ENST00000394272 CATR1Q13166 79 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 LAMTOR1Q6IAA8 161 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 C1orf229Q6ZS94 237 aaPredicted RBP16.63■□□□□ 0.25
HDDC3-202ENST00000394272 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.63■□□□□ 0.25
HDDC3-202ENST00000394272 NRGNQ92686 78 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 ZNF251Q9BRH9 671 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms