RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 LHX4Q969G2 390 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 TMEM265A0A087WTH1 108 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 CLDN34H7C241 214 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 PPP1R2P9O14990 202 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 G6PCP35575 357 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 TMEM41BQ5BJD5 291 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 C1orf210Q8IVY1 113 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 OR10G4Q8NGN3 311 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 TAF15Q92804 592 aaKnown RBP eCLIP11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 WDYHV1Q96HA8 205 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 PSMG3Q9BT73 122 aaPredicted RBP11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 SPRY4Q9C004 299 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 HIPK2Q9H2X6 1198 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 SDF2L1Q9HCN8 221 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 TINAGQ9UJW2 476 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 LRP5LA4QPB2 252 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 NPIPB11E5RHQ5 1161 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 ZNF737O75373 536 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 CYB5R3P00387 301 aaPredicted RBP11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 OR3A1P47881 315 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 ADIRFQ15847 76 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 TBC1D28Q2M2D7 210 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 FBXW9Q5XUX1 488 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 MOB1BQ7L9L4 216 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 NECAP1Q8NC96 275 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 ZPBPQ9BS86 351 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 SLC25A22Q9H936 323 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 SLC39A9Q9NUM3 307 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 CLN8Q9UBY8 286 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 VAX2Q9UIW0 290 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 PRR14LQ5THK1 2151 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 B4DEV8 164 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 SP1P08047 785 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 PPP1CBP62140 327 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 SPINK9Q5DT21 86 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 NANOS1Q8WY41 292 aaKnown RBP11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 OR2D2Q9H210 308 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 GP6Q9HCN6 339 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 PGA5P0DJD9 388 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 RPL30P62888 115 aaKnown RBP11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 SLC10A1Q14973 349 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 CLEC12BQ2HXU8 276 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 ATP1A1-AS1Q5TC04 95 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 BTNL3Q6UXE8 466 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 ZNF826PQ6ZT77 177 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 RPP25LQ8N5L8 163 aaKnown RBP11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 OR52L2PQ8NGH6 319 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 RPUSD4Q96CM3 377 aaKnown RBP11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 ARRDC1-AS1Q9H2J1 176 aa11.75□□□□□ -0.53
GAPVD1-205ENST00000394084 PIGBOS1A0A0B4J2F0 54 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 SEC14L6B5MCN3 397 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 WNT9BO14905 357 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 PSPNO60542 156 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 FABP4P15090 132 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 SERF2P84101 59 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 MRGPRGQ86SM5 289 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 SLC25A40Q8TBP6 338 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 PFDN5Q99471 154 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 SMIM7Q9BQ49 75 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 POLDIP2Q9Y2S7 368 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 SH2D1BO14796 132 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 SMPD2O60906 423 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 TUBG1P23258 451 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 ERVK11-1P61568 191 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 PNRC1Q12796 327 aaPredicted RBP11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 WDR25Q64LD2 544 aaPredicted RBP11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 ACSM6Q6P461 480 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 HIST3H2BBQ8N257 126 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 GATAD1Q8WUU5 269 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 SNX22Q96L94 193 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 CDH20Q9HBT6 801 aa11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 COL27A1Q8IZC6 1860 aaPredicted RBP11.74□□□□□ -0.53
GAPVD1-205ENST00000394084 LYZL6O75951 148 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 DEFA4P12838 97 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 LINC00205P59089 165 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 TNFRSF9Q07011 255 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 GCNT2Q8N0V5 402 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 C5orf30Q96GV9 206 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 DDA1Q9BW61 102 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 RYDENQ9NUL5 291 aaKnown RBP11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 ZMAT5Q9UDW3 170 aaKnown RBP11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 DMRT1Q9Y5R6 373 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 HAND1O96004 215 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 IFNA1P01562 189 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 AESQ08117 197 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 TPRX1Q8N7U7 411 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 KCNIP1Q9NZI2 227 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 SPRR3Q9UBC9 169 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 RBMXL2O75526 392 aaKnown RBP11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 S1PR2O95136 353 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 IL2RGP31785 369 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 CD81P60033 236 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 RNFT1Q5M7Z0 435 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 PINX1Q96BK5 328 aaKnown RBP11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 OBP2BQ9NPH6 170 aa11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 MBNL3Q9NUK0 354 aaKnown RBP11.73□□□□□ -0.53
GAPVD1-205ENST00000394084 C12orf77C9JDV5 145 aa11.72□□□□□ -0.53
GAPVD1-205ENST00000394084 WNT2P09544 360 aa11.72□□□□□ -0.53
GAPVD1-205ENST00000394084 RND2P52198 227 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms