RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CX3CL1P78423 397 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 AKIRIN2Q53H80 203 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 C1orf100Q5SVJ3 147 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 ACSM6Q6P461 480 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 DHRSXQ8N5I4 330 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 OR5AN1Q8NGI8 311 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 OR6Q1Q8NGQ2 317 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 CYGBQ8WWM9 190 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 PHYHIPQ92561 330 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 DLX4Q92988 240 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 FAM46BQ96A09 425 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 SULT4A1Q9BR01 284 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 TM2D1Q9BX74 207 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 RIMS4Q9H426 269 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 PLCXD1Q9NUJ7 323 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 SLC23A1Q9UHI7 598 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 PSORS1C1Q9UIG5 152 aa13.52□□□□□ -0.25
SNRPA1-202ENST00000394082 SAP30O75446 220 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 OR8U9P0C7N5 309 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 NDPQ00604 133 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 CASC10Q5T4H9 136 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 MOB1BQ7L9L4 216 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 SBSPONQ8IVN8 264 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 SVOPQ8N4V2 548 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 MS4A15Q8N5U1 240 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 KCNG3Q8TAE7 436 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 RCHY1Q96PM5 261 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 OR5B12Q96R08 314 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 FBXO7Q9Y3I1 522 aa13.51□□□□□ -0.25
SNRPA1-202ENST00000394082 TRBV6-6A0A0A6YYG2 114 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 PNMA8CA0A1B0GUJ8 204 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 A0A1W2PN81 502 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 ERICH4A6NGS2 130 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 MYL12BO14950 172 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 CT45A6P0DMU7 189 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 CT45A5P0DMU8 189 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 CT45A7P0DMV0 189 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 EGR2P11161 476 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 GP9P14770 177 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 CHRNA7P36544 502 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 RNLSQ5VYX0 342 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 GLT8D1Q68CQ7 371 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 FAM131AQ6UXB0 335 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 ZNF562Q6V9R5 426 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 NANOGP1Q8N7R0 232 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 FBLIM1Q8WUP2 373 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 FLYWCH2Q96CP2 140 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 CYYR1Q96J86 154 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 AGMATQ9BSE5 352 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 FAAP24Q9BTP7 215 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 TMEM59Q9BXS4 323 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 SLA2Q9H6Q3 261 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 MGAT4AQ9UM21 535 aa13.5□□□□□ -0.25
SNRPA1-202ENST00000394082 H0YJW9 148 aa13.49□□□□□ -0.25
SNRPA1-202ENST00000394082 HSPB1P04792 205 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-202ENST00000394082 SPNP16150 400 aa13.49□□□□□ -0.25
SNRPA1-202ENST00000394082 ECSCRQ19T08 205 aa13.49□□□□□ -0.25
SNRPA1-202ENST00000394082 LAIR2Q6ISS4 152 aa13.49□□□□□ -0.25
SNRPA1-202ENST00000394082 C6orf201Q7Z4U5 140 aa13.49□□□□□ -0.25
SNRPA1-202ENST00000394082 C5orf24Q7Z6I8 188 aa13.49□□□□□ -0.25
SNRPA1-202ENST00000394082 IL1F10Q8WWZ1 152 aa13.49□□□□□ -0.25
SNRPA1-202ENST00000394082 EDARADDQ8WWZ3 215 aa13.49□□□□□ -0.25
SNRPA1-202ENST00000394082 ALX4Q9H161 411 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-202ENST00000394082 WASHC3Q9Y3C0 194 aa13.49□□□□□ -0.25
SNRPA1-202ENST00000394082 DYNC2H1Q8NCM8 4307 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 SLC22A1O15245 554 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 ST8SIA5O15466 376 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 SPDEFO95238 335 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 BPNT1O95861 308 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 TFAP2AP05549 437 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 GSTP1P09211 210 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 FRMD6-AS1P0C7T7 363 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 HTR2CP28335 458 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 CD40LGP29965 261 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 SLURP1P55000 103 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 QRFPP83859 136 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 ACSM3Q53FZ2 586 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 ACTBL2Q562R1 376 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 LRRTM1Q86UE6 522 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 C8orf59Q8N0T1 100 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 PTX4Q96A99 478 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 RHOVQ96L33 236 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 FBXL15Q9H469 300 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 ZMAT4Q9H898 229 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 FKBP14Q9NWM8 211 aa13.48□□□□□ -0.25
SNRPA1-202ENST00000394082 IGHV4OR15-8A0A075B7B6 117 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 A0A087WW49 117 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 TMEM14DPA8MWL7 114 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 A8MZ25 164 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 FCN1O00602 326 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 ZBTB25P24278 435 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 UNC119Q13432 240 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 PLGLAQ15195 96 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 RPL39P5Q59GN2 51 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 OR10K2Q6IF99 312 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 AHSA2Q719I0 299 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 PPP1R27Q86WC6 154 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 VCXQ9H320 206 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 PLEKHJ1Q9NW61 149 aa13.47□□□□□ -0.25
SNRPA1-202ENST00000394082 H3BUA1 57 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms