RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 TPRX1Q8N7U7 411 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 OR10G4Q8NGN3 311 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 OR10G9Q8NGN4 311 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 OR10G7Q8NGN6 311 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 OR10J5Q8NHC4 309 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 PRO3102Q9H379 93 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 ZDHHC11Q9H8X9 412 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 A0A0G2JMM0 328 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 A0A1W2PPB8 328 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 A0A1W2PRS3 328 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 KIR3DP1A8MWS1 328 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 B4E171 279 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 SIAH2O43255 324 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 DUX1O43812 170 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 F2RP25116 425 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 OTX2P32243 289 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 TSPAN7P41732 249 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 ERVFC1-1P60608 527 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 ZNF525Q8N782 197 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 LRTM2Q8N967 370 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 WNT10AQ9GZT5 417 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 TIMM8BQ9Y5J9 83 aaPredicted RBP12.37□□□□□ -0.43
SFXN3-202ENST00000393459 KALRNO60229 2985 aa12.37□□□□□ -0.43
SFXN3-202ENST00000393459 DEFB108AA8MXU0 73 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 PMCHP20382 165 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 BAGE3Q86Y29 109 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 BAGE2Q86Y30 109 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 PLXDC1Q8IUK5 500 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 DECR2Q9NUI1 292 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 FOXJ2Q9P0K8 574 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 PTRH2Q9Y3E5 179 aaKnown RBP12.36□□□□□ -0.43
SFXN3-202ENST00000393459 MARCH11A6NNE9 402 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 RAMP3O60896 148 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 ZFAND5O76080 213 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 IGKV1-39P01597 117 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 IGKV1D-39P04432 117 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 RND2P52198 227 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 PNRC1Q12796 327 aaPredicted RBP12.36□□□□□ -0.43
SFXN3-202ENST00000393459 C11orf42Q8N5U0 333 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 PSMF1Q92530 271 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 SPSB1Q96BD6 273 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 ZNF552Q9H707 407 aaPredicted RBP12.36□□□□□ -0.43
SFXN3-202ENST00000393459 C11orf94C9JXX5 98 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 DLEU1O43261 78 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 RHBDL1O75783 438 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 HRASP01112 189 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 RPLP1P05386 114 aaKnown RBP12.36□□□□□ -0.43
SFXN3-202ENST00000393459 CD27P26842 260 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 ADMP35318 185 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 AAED1Q7RTV5 226 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 MRGPRGQ86SM5 289 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 SPACA9Q96E40 222 aaPredicted RBP12.36□□□□□ -0.43
SFXN3-202ENST00000393459 ACTR3CQ9C0K3 210 aaPredicted RBP12.36□□□□□ -0.43
SFXN3-202ENST00000393459 MTCH1Q9NZJ7 389 aa12.36□□□□□ -0.43
SFXN3-202ENST00000393459 IGHV3-43A0A0B4J1X8 118 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 A0A1B0GWJ7 208 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 IGHV3-43DP0DP04 118 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 PRB4P10163 310 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-202ENST00000393459 LHFPL2Q6ZUX7 228 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 CADM4Q8NFZ8 388 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 RFESDQ8TAC1 157 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 PCED1AQ9H1Q7 454 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 C11orf1Q9H5F2 150 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 ZNF703Q9H7S9 590 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-202ENST00000393459 B4DEV8 164 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 IFNA1P01562 189 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 NTF3P20783 257 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 CA6P23280 308 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 NPPCP23582 126 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 DAZAP2Q15038 168 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-202ENST00000393459 DBX2Q6ZNG2 339 aa12.35□□□□□ -0.43
SFXN3-202ENST00000393459 CPEB3Q8NE35 698 aaKnown RBP12.35□□□□□ -0.43
SFXN3-202ENST00000393459 TAF15Q92804 592 aaKnown RBP eCLIP12.35□□□□□ -0.43
SFXN3-202ENST00000393459 A0A1B0GW64 132 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 KBTBD11O94819 623 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 IGKV1-5P01602 117 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 WIPI1Q5MNZ9 446 aaPredicted RBP12.34□□□□□ -0.43
SFXN3-202ENST00000393459 CMTM2Q8TAZ6 248 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 CCDC74BQ96LY2 380 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 SMDT1Q9H4I9 107 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
SFXN3-202ENST00000393459 RNF114Q9Y508 228 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 TRAPPC2LH3BP13 241 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 SH2D1BO14796 132 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 GCGP01275 180 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 PRDX4Q13162 271 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 ZIC4Q8N9L1 334 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 TMEM56Q96MV1 263 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 DNAJC4Q9NNZ3 241 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 DEPPQ9NTK1 212 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 OR6C3Q9NZP0 311 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 TMEM56-RWDD3S4R434 201 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 ZG16O60844 167 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 SERF1AO75920 110 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 MAJINQ3KP22 176 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 HES3Q5TGS1 186 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 GBGT1Q8N5D6 347 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 NFAM1Q8NET5 270 aaPredicted RBP12.34□□□□□ -0.43
SFXN3-202ENST00000393459 OR1L1Q8NH94 360 aa12.34□□□□□ -0.43
SFXN3-202ENST00000393459 CLDN23Q96B33 292 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms