RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 LINC01560Q8TB33 94 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 TM2D1Q9BX74 207 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 TMEM167BQ9NRX6 74 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 A0A1B0GTI1 187 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 WNT9BO14905 357 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 CELA3BP08861 270 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 OVCH2Q7RTZ1 564 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 RBKSQ9H477 322 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 TRAPPC1Q9Y5R8 145 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 THADAQ6YHU6 1953 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 LINC00862A6NCI5 91 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 SEC11BP0C7V7 166 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 PSG5Q15238 335 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 C1orf162Q8NEQ5 155 aaPredicted RBP14.17□□□□□ -0.14
SCN3B-202ENST00000392770 OR52M1Q8NGK5 317 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 GOSR1O95249 250 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 FAM78BQ5VT40 261 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 PDPNQ86YL7 162 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 ZNF596Q8TC21 504 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 SLC2A8Q9NY64 477 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 SPRR3Q9UBC9 169 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 C11orf94C9JXX5 98 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 HKR1P10072 659 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 NTF3P20783 257 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 LEAP2Q969E1 77 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 TMEM218A2RU14 115 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 EFNA2O43921 213 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 GNG7O60262 68 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 MMP9P14780 707 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 H2BFSP57053 126 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 TEPPQ6URK8 271 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 KCNMB2Q9Y691 235 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 EFNB1P98172 346 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 NR2C2APQ86WQ0 139 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 GPR146Q96CH1 333 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 RHBDL1O75783 438 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 PTGDSP41222 190 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 SCNM1Q9BWG6 230 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 HILPDAQ9Y5L2 63 aa14.16□□□□□ -0.14
SCN3B-202ENST00000392770 IGHV3-21A0A0B4J1V1 117 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 IGHV3-72A0A0B4J1Y9 119 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 C10orf113Q5VZT2 155 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 LYZL4Q96KX0 146 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 NAT8Q9UHE5 227 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 CDK2AP1O14519 115 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 SS18L1O75177 396 aaPredicted RBP14.15□□□□□ -0.14
SCN3B-202ENST00000392770 SLC24A4Q8NFF2 622 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 CLDN34H7C241 214 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 RPEL1Q2QD12 228 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 CXorf66Q5JRM2 361 aaPredicted RBP14.15□□□□□ -0.14
SCN3B-202ENST00000392770 SIGLECL1Q8N7X8 197 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 LILRB1Q8NHL6 650 aaPredicted RBP14.15□□□□□ -0.14
SCN3B-202ENST00000392770 IGHV2OR16-5A0A0B4J2B6 119 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 Q0VFX4 171 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 TMEM187Q14656 261 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 ZNF705AQ6ZN79 300 aaPredicted RBP14.15□□□□□ -0.14
SCN3B-202ENST00000392770 OR4X1Q8NH49 305 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 B2MP61769 119 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 CCDC144NLQ6NUI1 221 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 DPPA3Q6W0C5 159 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 WDR61Q9GZS3 305 aaKnown RBP14.15□□□□□ -0.14
SCN3B-202ENST00000392770 SEMA5BQ9P283 1151 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 JPT1Q9UK76 154 aa14.15□□□□□ -0.14
SCN3B-202ENST00000392770 GAPDHP04406 335 aaKnown RBP14.14□□□□□ -0.15
SCN3B-202ENST00000392770 CALHM1Q8IU99 346 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 FAM24BQ8N5W8 94 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 VAX2Q9UIW0 290 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 GAS1P54826 345 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 ACP7Q6ZNF0 438 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 IGHV1-69-2A0A0G2JMI3 117 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 ZNF716A6NP11 495 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 DEFA6Q01524 100 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 SSX7Q7RTT5 188 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 FGFRL1Q8N441 504 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 GRAMD2BQ96HH9 432 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 TMUB1Q9BVT8 246 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 SEC11CQ9BY50 192 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 ANAPC1Q9H1A4 1944 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 H0YL77 283 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 COX6B1P14854 86 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 CD40P25942 277 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 CD1BP29016 333 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 AWAT1Q58HT5 328 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 MEGF10Q96KG7 1140 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 KLHDC3Q9BQ90 382 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 NDUFA2O43678 99 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 SPINK4O60575 86 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 RUNX1Q01196 453 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 WASHC3Q9Y3C0 194 aa14.14□□□□□ -0.15
SCN3B-202ENST00000392770 CABIN1Q9Y6J0 2220 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 PAX5Q02548 391 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 ECSCRQ19T08 205 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 TMEM252Q8N6L7 170 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 REPIN1Q9BWE0 567 aaKnown RBP14.13□□□□□ -0.15
SCN3B-202ENST00000392770 PAX6P26367 422 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 SSTR5P35346 364 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 KHDC3LQ587J8 217 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 ZNF788Q6ZQV5 615 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 STPG2Q8N412 459 aa14.13□□□□□ -0.15
SCN3B-202ENST00000392770 C19orf67A6NJJ6 358 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms