RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 SAA2P0DJI9 122 aaPredicted RBP12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 CBX5P45973 191 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 HES1Q14469 280 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 SPCS2Q15005 226 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 IGSF11Q5DX21 431 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 ODF3L1Q8IXM7 274 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 ISOC1Q96CN7 298 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 RBM14Q96PK6 669 aaKnown RBP12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 GINS4Q9BRT9 223 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 SLC25A33Q9BSK2 321 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 TOLLIPQ9H0E2 274 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 RDH8Q9NYR8 311 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 M0QZK8 103 aa12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 HPGDSO60760 199 aa12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 IGKV1D-33P01593 117 aa12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 IGKV1-33P01594 117 aa12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 TMEM11P17152 192 aa12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 CD1BP29016 333 aa12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 TAS2R20P59543 309 aa12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 ZNF833PQ6ZTB9 187 aa12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 OR2T6Q8NHC8 308 aa12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 LINC01006Q8NI28 216 aa12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 S1PR3Q99500 378 aa12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 PARP12Q9H0J9 701 aaKnown RBP12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 C11orf54Q9H0W9 315 aaPredicted RBP12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 CCDC59Q9P031 241 aaKnown RBP12.04□□□□□ -0.48
IGHV3-53-201ENST00000390627 IGKV1D-8A0A087WSZ0 117 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 IGHV3-72A0A0B4J1Y9 119 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 FAM25AB3EWG3 89 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 FAM25CB3EWG5 89 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 FAM25GB3EWG6 89 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 H3BMQ9 156 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 CNIH2Q6PI25 160 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 C11orf88Q6PI97 169 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 OR2T10Q8NGZ9 312 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 AGMATQ9BSE5 352 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 MRPL20Q9BYC9 149 aaKnown RBP12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 PRSS22Q9GZN4 317 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 ZNF221Q9UK13 617 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 MOB4Q9Y3A3 225 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 RNF114Q9Y508 228 aa12.03□□□□□ -0.48
IGHV3-53-201ENST00000390627 DNHD1Q96M86 4753 aa12.02□□□□□ -0.48
IGHV3-53-201ENST00000390627 CCDC160A6NGH7 325 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 ELK1P19419 428 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 GPR12P47775 334 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 OR3A3P47888 321 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 ARPC4P59998 168 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 LSAMPQ13449 338 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 EBI3Q14213 229 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 HOGA1Q86XE5 327 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 BEST4Q8NFU0 473 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 DYNC2LI1Q8TCX1 351 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 ABHD14BQ96IU4 210 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 NABP2Q9BQ15 211 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 ZNF747Q9BV97 191 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 ZNF702PQ9H963 129 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 IFT46Q9NQC8 304 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 RBM7Q9Y580 266 aaKnown RBP12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 CEPT1Q9Y6K0 416 aa12.02□□□□□ -0.49
IGHV3-53-201ENST00000390627 MOSP00540 346 aa12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 PTHLHP12272 177 aa12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 PRSS3P35030 304 aa12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 FBLN7Q53RD9 439 aa12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 RPL39P5Q59GN2 51 aa12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 ARSJQ5FYB0 599 aaPredicted RBP12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 H1FOOQ8IZA3 346 aaPredicted RBP12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 Q8N2B8 174 aa12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 GVQW1Q8N7I0 195 aa12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 WFDC12Q8WWY7 111 aa12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 EAF1Q96JC9 268 aaPredicted RBP12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 ZNF251Q9BRH9 671 aa12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 ADAM30Q9UKF2 790 aa12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 MRPS7Q9Y2R9 242 aaKnown RBP12.01□□□□□ -0.49
IGHV3-53-201ENST00000390627 RGS5O15539 181 aa12□□□□□ -0.49
IGHV3-53-201ENST00000390627 FGF16O43320 207 aa12□□□□□ -0.49
IGHV3-53-201ENST00000390627 OR8U9P0C7N5 309 aa12□□□□□ -0.49
IGHV3-53-201ENST00000390627 PROK1P58294 105 aa12□□□□□ -0.49
IGHV3-53-201ENST00000390627 HNF4GQ14541 408 aa12□□□□□ -0.49
IGHV3-53-201ENST00000390627 SHISA2Q6UWI4 295 aa12□□□□□ -0.49
IGHV3-53-201ENST00000390627 OR8H1Q8NGG4 311 aa12□□□□□ -0.49
IGHV3-53-201ENST00000390627 OR8U1Q8NH10 309 aa12□□□□□ -0.49
IGHV3-53-201ENST00000390627 OR2D2Q9H210 308 aa12□□□□□ -0.49
IGHV3-53-201ENST00000390627 EXTL2Q9UBQ6 330 aa12□□□□□ -0.49
IGHV3-53-201ENST00000390627 RNF150Q9ULK6 438 aa12□□□□□ -0.49
IGHV3-53-201ENST00000390627 MEIS3P1A6NDR6 274 aa11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 OR5H14A6NHG9 310 aa11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 ZNF736B4DX44 427 aaPredicted RBP11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 HAX1O00165 279 aa11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 HLA-DQB1P01920 261 aa11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 BLCAPP62952 87 aa11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 ABCA11PQ4W5N1 156 aa11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 SNX29P2Q8IUI4 249 aa11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 Q8N6K4 173 aa11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 SCPEP1Q9HB40 452 aa11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 NECAP2Q9NVZ3 263 aa11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 RSL24D1Q9UHA3 163 aaKnown RBP11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 ANAPC10Q9UM13 185 aa11.99□□□□□ -0.49
IGHV3-53-201ENST00000390627 GAB2Q9UQC2 676 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms