RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 TSPAN32Q96QS1 320 aa6.36□□□□□ -1.39
TRBV28-201ENST00000390400 PCGF1Q9BSM1 259 aa6.36□□□□□ -1.39
TRBV28-201ENST00000390400 OR2S2Q9NQN1 319 aa6.36□□□□□ -1.39
TRBV28-201ENST00000390400 GPR84Q9NQS5 396 aa6.36□□□□□ -1.39
TRBV28-201ENST00000390400 MED29Q9NX70 200 aa6.36□□□□□ -1.39
TRBV28-201ENST00000390400 SPTAN1Q13813 2472 aaKnown RBP6.36□□□□□ -1.39
TRBV28-201ENST00000390400 SPENQ96T58 3664 aaKnown RBP6.36□□□□□ -1.39
TRBV28-201ENST00000390400 SMG1Q96Q15 3661 aaKnown RBP6.35□□□□□ -1.39
TRBV28-201ENST00000390400 A0A1B0GU03 582 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 HSD17B6O14756 317 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 MRPL33O75394 65 aaKnown RBP6.35□□□□□ -1.39
TRBV28-201ENST00000390400 SRSF10O75494 262 aaKnown RBP6.35□□□□□ -1.39
TRBV28-201ENST00000390400 IFNA1P01562 189 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 PRH1P02810 166 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 SFTPBP07988 381 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 SRP19P09132 144 aaKnown RBP6.35□□□□□ -1.39
TRBV28-201ENST00000390400 TRGC1P0CF51 173 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 FABP4P15090 132 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 DUSP1P28562 367 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 OR10J1P30954 320 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 CEACAM8P31997 349 aaPredicted RBP6.35□□□□□ -1.39
TRBV28-201ENST00000390400 SUPT4H1P63272 117 aaKnown RBP6.35□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF616Q08AN1 781 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 GUSBP1Q15486 140 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 IAH1Q2TAA2 248 aaPredicted RBP6.35□□□□□ -1.39
TRBV28-201ENST00000390400 CARD17Q5XLA6 110 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 PET117Q6UWS5 81 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF429Q86V71 674 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF100Q8IYN0 542 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 H1FOOQ8IZA3 346 aaPredicted RBP6.35□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF664Q8N3J9 261 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 FAM89BQ8N5H3 189 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 ZIC4Q8N9L1 334 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 OR5D14Q8NGL3 314 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 OR6N2Q8NGY6 317 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 OR52N5Q8NH56 324 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF519Q8TB69 540 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 MARCH1Q8TCQ1 289 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 ABHD5Q8WTS1 349 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 RND1Q92730 232 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 APH1AQ96BI3 265 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 C10orf35Q96D05 121 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 EMC6Q9BV81 110 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 SFXN3Q9BWM7 321 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 OR14J1Q9UGF5 321 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 RALYQ9UKM9 306 aaKnown RBP6.35□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF346Q9UL40 294 aaKnown RBP6.35□□□□□ -1.39
TRBV28-201ENST00000390400 WSB1Q9Y6I7 421 aa6.35□□□□□ -1.39
TRBV28-201ENST00000390400 LRRK2Q5S007 2527 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 NCOA6Q14686 2063 aaPredicted RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 TRAV9-1A0A075B6T8 112 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 PRSS37A4D1T9 235 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 CRYM-AS1A6NIL9 109 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 H0YL77 283 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 ST8SIA3O43173 380 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 SOX15O60248 233 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 RPP14O95059 124 aaKnown RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 SCAF4O95104 1147 aaKnown RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 PMP2P02689 132 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 ARG1P05089 322 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 CST2P09228 141 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 NR2C1P13056 603 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 CD99P14209 185 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 OPRM1P35372 400 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 CD200P41217 278 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 CDKN2AP42771 156 aaKnown RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 OR3A2P47893 321 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF133P52736 654 aaPredicted RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 UBE2NP61088 152 aaKnown RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 HIST1H3AP68431 136 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 FOXF2Q12947 444 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 GNMTQ14749 295 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 NUFIP2Q7Z417 695 aaKnown RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 C20orf196Q8IYI0 205 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 TMEM123Q8N131 208 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 SLC35G3Q8N808 338 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 ADAD2Q8NCV1 583 aaKnown RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 OR10J5Q8NHC4 309 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 MRGPRDQ8TDS7 321 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 TMEM170AQ8WVE7 144 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 BSCL2Q96G97 398 aaPredicted RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 RTBDNQ9BSG5 229 aaPredicted RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 TMEM208Q9BTX3 173 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 PARD6GQ9BYG4 376 aaPredicted RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 ELOVL3Q9HB03 270 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 LYRM2Q9NU23 88 aaPredicted RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 CISD1Q9NZ45 108 aaKnown RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 PROCRQ9UNN8 238 aa6.34□□□□□ -1.39
TRBV28-201ENST00000390400 USP9XQ93008 2570 aaPredicted RBP6.34□□□□□ -1.39
TRBV28-201ENST00000390400 ANKHD1Q8IWZ3 2542 aaKnown RBP6.33□□□□□ -1.4
TRBV28-201ENST00000390400 DOPEY1Q5JWR5 2465 aa6.33□□□□□ -1.4
TRBV28-201ENST00000390400 CLEC18AA5D8T8 446 aa6.33□□□□□ -1.4
TRBV28-201ENST00000390400 PRR32B1ATL7 298 aa6.33□□□□□ -1.4
TRBV28-201ENST00000390400 TMEM250H0YL14 139 aa6.33□□□□□ -1.4
TRBV28-201ENST00000390400 H7C1C5 153 aa6.33□□□□□ -1.4
TRBV28-201ENST00000390400 NDUFS8O00217 210 aa6.33□□□□□ -1.4
TRBV28-201ENST00000390400 GEMIN2O14893 280 aaKnown RBP6.33□□□□□ -1.4
TRBV28-201ENST00000390400 CYB5BO43169 146 aa6.33□□□□□ -1.4
TRBV28-201ENST00000390400 TNFSF13O75888 250 aa6.33□□□□□ -1.4
TRBV28-201ENST00000390400 IGHV3-9P01782 118 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms