RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 DCAF16Q9NXF7 216 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 TMEM30CPA0ZSE6 113 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 H0Y980 276 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 PMELP40967 661 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 DEFB108BQ8NET1 73 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 SLC35E1Q96K37 410 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 FBLN5Q9UBX5 448 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 TOX3O15405 576 aaPredicted RBP12.27□□□□□ -0.45
RTF1-201ENST00000389629 TFPI2P48307 235 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 GTF2H5Q6ZYL4 71 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 DBX1A6NMT0 343 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 ENSAO43768 121 aaKnown RBP12.26□□□□□ -0.45
RTF1-201ENST00000389629 SRSF10O75494 262 aaKnown RBP12.26□□□□□ -0.45
RTF1-201ENST00000389629 DMWDQ09019 674 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 PSG5Q15238 335 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 TRAT1Q6PIZ9 186 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 OR8I2Q8N0Y5 310 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 ST6GALNAC3Q8NDV1 305 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 RAB9BQ9NP90 201 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 PLXNA2O75051 1894 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 CA11O75493 328 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 NUTF2P61970 127 aaKnown RBP12.26□□□□□ -0.45
RTF1-201ENST00000389629 PARD6GQ9BYG4 376 aaPredicted RBP12.26□□□□□ -0.45
RTF1-201ENST00000389629 OCIAD1Q9NX40 245 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 CEP250Q9BV73 2442 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 CSN3P07498 182 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
RTF1-201ENST00000389629 LIFP15018 202 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 FCER1GP30273 86 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 TM2D1Q9BX74 207 aa12.26□□□□□ -0.45
RTF1-201ENST00000389629 RALGAPA1Q6GYQ0 2036 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 PMS2P1A4D2B8 440 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 WDR74Q6RFH5 385 aaPredicted RBP12.25□□□□□ -0.45
RTF1-201ENST00000389629 OR4B1Q8NGF8 309 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 HSD17B10Q99714 261 aaKnown RBP12.25□□□□□ -0.45
RTF1-201ENST00000389629 WIPI2Q9Y4P8 454 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 BMPR1BO00238 502 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 SRD5A2P31213 254 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 HES3Q5TGS1 186 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 CDPF1Q6NVV7 123 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 MOB1BQ7L9L4 216 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 MESP1Q9BRJ9 268 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 SF3B5Q9BWJ5 86 aaKnown RBP12.25□□□□□ -0.45
RTF1-201ENST00000389629 DEFB127Q9H1M4 99 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 UQCR10Q9UDW1 63 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 ZNF835Q9Y2P0 537 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 S100A7P31151 101 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 GPR35Q9HC97 309 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 FSCN3Q9NQT6 498 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 SIT1Q9Y3P8 196 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 SERTM2A0A1B0GWG4 89 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 SLC22A20A6NK97 555 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 RAB29O14966 203 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 DNM1P46Q6ZS02 220 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 CYP2G1PQ6ZSU1 146 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 LHFPL1Q86WI0 220 aa12.25□□□□□ -0.45
RTF1-201ENST00000389629 TECRQ9NZ01 308 aaKnown RBP12.25□□□□□ -0.45
RTF1-201ENST00000389629 HELTA6NFD8 242 aa12.24□□□□□ -0.45
RTF1-201ENST00000389629 ZNF664Q8N3J9 261 aa12.24□□□□□ -0.45
RTF1-201ENST00000389629 EDARADDQ8WWZ3 215 aa12.24□□□□□ -0.45
RTF1-201ENST00000389629 PHF7Q9BWX1 381 aaPredicted RBP12.24□□□□□ -0.45
RTF1-201ENST00000389629 OR4A8P0C604 315 aa12.24□□□□□ -0.45
RTF1-201ENST00000389629 PHF3Q92576 2039 aaKnown RBP12.24□□□□□ -0.45
RTF1-201ENST00000389629 PRR19A6NJB7 356 aa12.24□□□□□ -0.45
RTF1-201ENST00000389629 MNX1P50219 401 aaPredicted RBP12.24□□□□□ -0.45
RTF1-201ENST00000389629 MRPL13Q9BYD1 178 aaKnown RBP12.24□□□□□ -0.45
RTF1-201ENST00000389629 WNT10AQ9GZT5 417 aa12.24□□□□□ -0.45
RTF1-201ENST00000389629 CDIPTO14735 213 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 CD46P15529 392 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 OR4A47Q6IF82 309 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 OR8G5Q8NG78 346 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 THSD7BQ9C0I4 1608 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 COL4A6Q14031 1691 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 IGHV2-5P01817 119 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 ABCA7Q8IZY2 2146 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 FGFRL1Q8N441 504 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 ZCCHC14Q8WYQ9 949 aaKnown RBP12.23□□□□□ -0.45
RTF1-201ENST00000389629 ABHD14BQ96IU4 210 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 SLC45A2Q9UMX9 530 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 GVINP1Q7Z2Y8 2422 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 EREGO14944 169 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 COX7A2P2O60397 106 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 RPL24P83731 157 aaKnown RBP12.23□□□□□ -0.45
RTF1-201ENST00000389629 ERASQ7Z444 233 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 R3HDM4Q96D70 268 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 WBP1Q96G27 269 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 OR2J1Q9GZK6 312 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 ALPK3Q96L96 1907 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 PCNTO95613 3336 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 RPL23P62829 140 aaKnown RBP12.23□□□□□ -0.45
RTF1-201ENST00000389629 C10orf91Q5T1B1 145 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 TCF23Q7RTU1 214 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 FAM89BQ8N5H3 189 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 ZNF524Q96C55 264 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 SH2D2AQ9NP31 389 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 GLRX2Q9NS18 164 aa12.23□□□□□ -0.45
RTF1-201ENST00000389629 CD33P20138 364 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 OTX1P32242 354 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms