RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 COX11Q9Y6N1 276 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 ARHGAP21Q5T5U3 1957 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 C2orf72A6NCS6 295 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 CD46P15529 392 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 TMEM211Q6ICI0 200 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 C17orf82Q86X59 251 aaPredicted RBP12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 C1orf174Q8IYL3 243 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 OR5D13Q8NGL4 314 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 THAP3Q8WTV1 239 aaPredicted RBP12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 GPR146Q96CH1 333 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 NEIL1Q96FI4 390 aaPredicted RBP12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 OR4C12Q96R67 309 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 RNF2Q99496 336 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 RNF114Q9Y508 228 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 RSPO1Q2MKA7 263 aaPredicted RBP12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 ASCL4Q6XD76 172 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 GCNT2Q8N0V5 402 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 ST8SIA1Q92185 356 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 C10orf35Q96D05 121 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 WWTR1Q9GZV5 400 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 ZDHHC11Q9H8X9 412 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 CELSR3Q9NYQ7 3312 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 C1QTNF9BB2RNN3 333 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 H3BMH7 237 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 H3BML4 177 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 HYPMO75409 117 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 IGHEP01854 428 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 IGLC2P0DOY2 106 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 IGLC3P0DOY3 106 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 MPLP40238 635 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 PDCD1Q15116 288 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 LPAL2Q16609 132 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 SPATA45Q537H7 98 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 OR2D3Q8NGH3 330 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 SPSB1Q96BD6 273 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 ZNF703Q9H7S9 590 aaPredicted RBP12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 FBXL7Q9UJT9 491 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 DOCK11Q5JSL3 2073 aa12.49□□□□□ -0.41
VPS9D1-201ENST00000389386 IGKV1D-13A0A0B4J2D9 117 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 IGKV1-12A0A0C4DH73 117 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 MMP23AO75900 390 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 IGKV1D-12P01611 117 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 IGKV1-13P0DP09 117 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 MYBPHQ13203 477 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 Q6ZN92 141 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 ZNF738Q8NE65 137 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 SGMS2Q8NHU3 365 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 TAF15Q92804 592 aaKnown RBP eCLIP12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 SHISA8B8ZZ34 492 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 LAMTOR5O43504 91 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 TRAF3IP2O43734 574 aaPredicted RBP12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 PDCD6O75340 191 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 CRISP2P16562 243 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 UNQ5815/PRO19632Q6UWF5 114 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 OSR2Q8N2R0 312 aa12.48□□□□□ -0.41
VPS9D1-201ENST00000389386 IGHV2-70DA0A0C4DH43 119 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 ANKUB1A6NFN9 424 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 SLC22A20A6NK97 555 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 F6UZH7 168 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 H0Y980 276 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 EFNA2O43921 213 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 OPN1LWP04000 364 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 SUMO1P63165 101 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 MALLQ13021 153 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 IZUMO4Q1ZYL8 232 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 Q6ZRM9 215 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 KMT5CQ86Y97 462 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 APH1AQ96BI3 265 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 TXN2Q99757 166 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 SLC25A22Q9H936 323 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 FGF21Q9NSA1 209 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 PSENENQ9NZ42 101 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 ST3GAL6Q9Y274 331 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 IGHV2OR16-5A0A0B4J2B6 119 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 DIRC3C9JPN6 131 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 PAGE4O60829 102 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 IAPPP10997 89 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 SLC25A6P12236 298 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 FBLP22087 321 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 HNRNPA3P51991 378 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 UBE2G2P60604 165 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 HBG1P69891 147 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 HBG2P69892 147 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 MORN2Q502X0 79 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 FFAR4Q5NUL3 377 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 SAMD10Q9BYL1 202 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 TUBG2Q9NRH3 451 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 CCL28Q9NRJ3 127 aa12.47□□□□□ -0.41
VPS9D1-201ENST00000389386 IGKV3D-11A0A0A0MRZ8 115 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 CTXND1A0A1B0GTU2 59 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 HIST3H3Q16695 136 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 FAM69BQ5VUD6 431 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 ACSM6Q6P461 480 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 SDK2Q58EX2 2172 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 F2Z2F3 143 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 SYNGR2O43760 224 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 DUX1O43812 170 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 MLF1P58340 268 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 KRTDAPP60985 99 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 FBLN7Q53RD9 439 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms