RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 TAMM41Q96BW9 452 aa1□□□□□ -2.25
RNU6-39P-201ENST00000384344 SERPINB11Q96P15 392 aa1□□□□□ -2.25
RNU6-39P-201ENST00000384344 TRNT1Q96Q11 434 aaKnown RBP1□□□□□ -2.25
RNU6-39P-201ENST00000384344 HBEGFQ99075 208 aa1□□□□□ -2.25
RNU6-39P-201ENST00000384344 CYTH2Q99418 400 aa1□□□□□ -2.25
RNU6-39P-201ENST00000384344 MIEN1Q9BRT3 115 aa1□□□□□ -2.25
RNU6-39P-201ENST00000384344 ZNF426Q9BUY5 554 aa1□□□□□ -2.25
RNU6-39P-201ENST00000384344 ZNF471Q9BX82 626 aaPredicted RBP1□□□□□ -2.25
RNU6-39P-201ENST00000384344 MRPL32Q9BYC8 188 aaKnown RBP1□□□□□ -2.25
RNU6-39P-201ENST00000384344 EIF5A2Q9GZV4 153 aaKnown RBP1□□□□□ -2.25
RNU6-39P-201ENST00000384344 C11orf1Q9H5F2 150 aa1□□□□□ -2.25
RNU6-39P-201ENST00000384344 BABAM2Q9NXR7 383 aa1□□□□□ -2.25
RNU6-39P-201ENST00000384344 HELZ2Q9BYK8 2649 aaKnown RBP1□□□□□ -2.25
RNU6-39P-201ENST00000384344 CEP350Q5VT06 3117 aa1□□□□□ -2.25
RNU6-39P-201ENST00000384344 ATG2BQ96BY7 2078 aa1□□□□□ -2.25
RNU6-39P-201ENST00000384344 NCOR2Q9Y618 2525 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 ANKRD11Q6UB99 2663 aaPredicted RBP0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 MAP3K19Q56UN5 1328 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 FLNBO75369 2602 aaKnown RBP0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 C11orf86A6NJI1 115 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 ZW10O43264 779 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 SGCEO43556 437 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 PSMG1O95456 288 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 LIMS3P0CW19 117 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 LIMS4P0CW20 117 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 AGTR1P30556 359 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 OPRM1P35372 400 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 C1DQ13901 141 aaKnown RBP0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 NATD1Q8N6N6 113 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 CCDC112Q8NEF3 446 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 ATP6V1C2Q8NEY4 427 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 OR5J2Q8NH18 312 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 SMIM12Q96EX1 92 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 TBX5Q99593 518 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 ACBD6Q9BR61 282 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 MED28Q9H204 178 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 UBQLN4Q9NRR5 601 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 CHMP5Q9NZZ3 219 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 MRM2Q9UI43 246 aaKnown RBP0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 ENPP5Q9UJA9 477 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 MRPS16Q9Y3D3 137 aaKnown RBP0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 MYO5BQ9ULV0 1848 aa0.99□□□□□ -2.25
RNU6-39P-201ENST00000384344 RGS12O14924 1447 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 KIAA0232Q92628 1395 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 LOC100506127A0A0U1RQW1 187 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 F5H5K5 113 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 SLC17A3O00476 420 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 UBE2L6O14933 153 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 TPM1P09493 284 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 UCHL1P09936 223 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 OR10A3P58181 314 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 FGF12P61328 243 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 SYCP1Q15431 976 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 TBC1D28Q2M2D7 210 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 Q3ZCU0 254 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 SCGB1D4Q6XE38 83 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 C2orf91Q6ZV80 131 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 COA5Q86WW8 74 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 TMEM75Q8N9X5 138 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 OR8B12Q8NGG6 310 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 TNFAIP8L1Q8WVP5 186 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 RNF133Q8WVZ7 376 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 FGF13Q92913 245 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 TMIGD2Q96BF3 282 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 NKX6-2Q9C056 277 aaPredicted RBP0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 C16orf95Q9H693 158 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 PRO2289Q9P1D8 64 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 PRRC2BQ5JSZ5 2229 aaKnown RBP0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 JMJD1CQ15652 2540 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 VWFP04275 2813 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 CR1P17927 2039 aa0.98□□□□□ -2.25
RNU6-39P-201ENST00000384344 NAV2Q8IVL1 2488 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 CACNA1SQ13698 1873 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 HECTD1Q9ULT8 2610 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 IGKV1D-43A0A0B4J1Z2 117 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 TRAV41A0A0B4J266 112 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 ARL6IP5O75915 188 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 IGHV1-69P01742 117 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 PVALBP20472 110 aaPredicted RBP0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 CFL1P23528 166 aaKnown RBP0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 DLX6P56179 175 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 CTBP2P56545 445 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 DAD1P61803 113 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 USF2Q15853 346 aaPredicted RBP0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 CLEC12BQ2HXU8 276 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 RBM48Q5RL73 367 aaKnown RBP0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 FAM201AQ5SY85 155 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 AMTNQ6UX39 209 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 SLC35E3Q7Z769 313 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 LHFPL1Q86WI0 220 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 OR2D3Q8NGH3 330 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 TMEM56Q96MV1 263 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 TIMM21Q9BVV7 248 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 C8orf4Q9NR00 106 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 DENND4BO75064 1496 aaPredicted RBP0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 ABCA12Q86UK0 2595 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 EPG5Q9HCE0 2579 aa0.97□□□□□ -2.25
RNU6-39P-201ENST00000384344 TRPM6Q9BX84 2022 aa0.96□□□□□ -2.26
RNU6-39P-201ENST00000384344 ITPR3Q14573 2671 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms