RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 SIRT7Q9NRC8 400 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 FZR1Q9UM11 496 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 ZNF729A6NN14 1252 aaPredicted RBP13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 SEC14L6B5MCN3 397 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 SYNGR2O43760 224 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 WDR1O75083 606 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 TESK1Q15569 626 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 WDR25Q64LD2 544 aaPredicted RBP13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 CXorf67Q86X51 503 aaPredicted RBP13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 MDS2Q8NDY4 140 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 SCGB1C1Q8TD33 95 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 OR5P3Q8WZ94 311 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 POM121L2Q96KW2 1035 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 A0A1B0GU03 582 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 CXorf65A6NEN9 183 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 SIRPB1O00241 398 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 AGFG2O95081 481 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 IL18BPO95998 194 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 WT1P19544 449 aaPredicted RBP13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 RPS16P62249 146 aaKnown RBP13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 GAMTQ14353 236 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 OR8G1Q15617 311 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 SRSF7Q16629 238 aaKnown RBP eCLIP13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 CLEC12BQ2HXU8 276 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 ALKBH6Q3KRA9 238 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 NECAP1Q8NC96 275 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 OR10V1Q8NGI7 309 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 IL22RA2Q969J5 263 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 LOXL4Q96JB6 756 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 TREM2Q9NZC2 230 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 RBM7Q9Y580 266 aaKnown RBP13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 IGKV1D-33P01593 117 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 IGKV1-33P01594 117 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 CTXN2P0C2S0 81 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 RNPS1Q15287 305 aaKnown RBP13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 SAXO1Q8IYX7 474 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 LILRB2Q8N423 598 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 WDYHV1Q96HA8 205 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 USF3Q68DE3 2245 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 TNRC6AQ8NDV7 1962 aaKnown RBP13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 UBE2L5PA0A1B0GUS4 154 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 GRPP07492 148 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 ZNF585BQ52M93 769 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM58AQ8N1B3 248 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 RAB40CQ96S21 281 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 LINC00470Q9BZP3 86 aa13.74□□□□□ -0.21
NKX3-1-201ENST00000380871 ARR3P36575 388 aa13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 OR8G2PQ6IF36 304 aa13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 C1orf87Q8N0U7 546 aa13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 OR4C12Q96R67 309 aa13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 PRO1933Q9H354 126 aa13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 CISD1Q9NZ45 108 aaKnown RBP13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 CADP27708 2225 aa13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 TRAV1-1A0A0B4J248 108 aa13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 DEFA4P12838 97 aa13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 GPX4P36969 197 aaPredicted RBP13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 OR5A2Q8NGI9 324 aa13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 PARD6AQ9NPB6 346 aa13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 DMXL1Q9Y485 3027 aa13.73□□□□□ -0.21
NKX3-1-201ENST00000380871 FTH1P19P0C7X4 201 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 MDH2P40926 338 aaKnown RBP13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 UBE2NP61088 152 aaKnown RBP13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 DEFB109BQ30KR1 87 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 FBXW9Q5XUX1 488 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 DPPA3Q6W0C5 159 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 OR2J1Q9GZK6 312 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 SDF2L1Q9HCN8 221 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 TMEM178AQ8NBL3 297 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 S100PBPQ96BU1 408 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 MAP1LC3B2A6NCE7 125 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 OR5H1A6NKK0 313 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 CLDN34H7C241 214 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 PHOX2AO14813 284 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 SS18L1O75177 396 aaPredicted RBP13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 CYB5R3P00387 301 aaPredicted RBP13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 GATAD1Q8WUU5 269 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 CABLES2Q9BTV7 478 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 MAP1LC3BQ9GZQ8 125 aa13.72□□□□□ -0.21
NKX3-1-201ENST00000380871 DEGS1O15121 323 aa13.71□□□□□ -0.21
NKX3-1-201ENST00000380871 TFF1P04155 84 aa13.71□□□□□ -0.21
NKX3-1-201ENST00000380871 S100GP29377 79 aa13.71□□□□□ -0.21
NKX3-1-201ENST00000380871 ADIRFQ15847 76 aa13.71□□□□□ -0.21
NKX3-1-201ENST00000380871 HIPK2Q9H2X6 1198 aa13.71□□□□□ -0.21
NKX3-1-201ENST00000380871 CEBPDP49716 269 aaPredicted RBP13.71□□□□□ -0.22
NKX3-1-201ENST00000380871 RTP5Q14D33 572 aa13.71□□□□□ -0.22
NKX3-1-201ENST00000380871 WDR86Q86TI4 376 aa13.71□□□□□ -0.22
NKX3-1-201ENST00000380871 CDH20Q9HBT6 801 aa13.71□□□□□ -0.22
NKX3-1-201ENST00000380871 RNF150Q9ULK6 438 aa13.71□□□□□ -0.22
NKX3-1-201ENST00000380871 RAMP3O60896 148 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 TUBG1P23258 451 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 LRRC75BQ2VPJ9 315 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 RPP25LQ8N5L8 163 aaKnown RBP13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 RPUSD4Q96CM3 377 aaKnown RBP13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 SLC25A22Q9H936 323 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 ROS1P08922 2347 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 HIST1H1BP16401 226 aaKnown RBP13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 RND2P52198 227 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 CD81P60033 236 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 DEFA6Q01524 100 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 OR10G4Q8NGN3 311 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms