RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 PLA2G5P39877 138 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 CEACAM6P40199 344 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 CD200P41217 278 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 HERV-K104P61576 105 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 DLK1P80370 383 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 DNLZQ5SXM8 178 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 RTN4IP1Q8WWV3 396 aaPredicted RBP12.07□□□□□ -0.48
CLCN4-201ENST00000380829 ABHD17AQ96GS6 310 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 BOD1Q96IK1 185 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 PBDC1Q9BVG4 233 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 SCNM1Q9BWG6 230 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 OBP2BQ9NPH6 170 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 SLC2A9Q9NRM0 540 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 C1orf123Q9NWV4 160 aa12.07□□□□□ -0.48
CLCN4-201ENST00000380829 IGHV1-18A0A0C4DH31 117 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 ZNF705GA8MUZ8 300 aaPredicted RBP12.06□□□□□ -0.48
CLCN4-201ENST00000380829 DEDDO75618 318 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 PPYP01298 95 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 CRYABP02511 175 aaKnown RBP12.06□□□□□ -0.48
CLCN4-201ENST00000380829 FABP6P51161 128 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 HERPUD1Q15011 391 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 P2RY6Q15077 328 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 SNHG12Q9BXW3 62 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 MLNRO43193 412 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 OR5AC1P0C628 307 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 ASCL1P50553 236 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 HOXA4Q00056 320 aaPredicted RBP12.06□□□□□ -0.48
CLCN4-201ENST00000380829 IL13RA2Q14627 380 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 C1orf185Q5T7R7 199 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 LINC00596Q86U02 117 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 MRPL30Q8TCC3 161 aaKnown RBP12.06□□□□□ -0.48
CLCN4-201ENST00000380829 NAA60Q9H7X0 242 aa12.06□□□□□ -0.48
CLCN4-201ENST00000380829 RP1L1Q8IWN7 2480 aaPredicted RBP12.05□□□□□ -0.48
CLCN4-201ENST00000380829 IGHV2OR16-5A0A0B4J2B6 119 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 SIRPB1O00241 398 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 DEGS1O15121 323 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 IGLV1-44P01699 117 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 PGA5P0DJD9 388 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 FGF7P21781 194 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 ZNF474Q6S9Z5 364 aaPredicted RBP12.05□□□□□ -0.48
CLCN4-201ENST00000380829 MEMO1Q9Y316 297 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 FAM180AQ6UWF9 173 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 SPACA3Q8IXA5 215 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 RAB24Q969Q5 203 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 MRPL24Q96A35 216 aaKnown RBP12.05□□□□□ -0.48
CLCN4-201ENST00000380829 MSL2Q9HCI7 577 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 POLDIP2Q9Y2S7 368 aa12.05□□□□□ -0.48
CLCN4-201ENST00000380829 PIEZO2Q9H5I5 2752 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 TRAV39A0A0B4J263 110 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 IGKV1-6A0A0C4DH72 117 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 TRDCB7Z8K6 153 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 TIMM8AO60220 97 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-201ENST00000380829 SCAF4O95104 1147 aaKnown RBP12.04□□□□□ -0.48
CLCN4-201ENST00000380829 NXPH2O95156 264 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 CD81P60033 236 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 Q6P435 159 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 Q6ZS49 121 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 ZNF826PQ6ZT77 177 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 OR8G5Q8NG78 346 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 ABHD14AQ9BUJ0 271 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 CBY1Q9Y3M2 126 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 SLC25A15Q9Y619 301 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 ATP23Q9Y6H3 246 aa12.04□□□□□ -0.48
CLCN4-201ENST00000380829 A6NNC1 897 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 HSD17B6O14756 317 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 OR2H2O95918 312 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 TK1P04183 234 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 SEC11BP0C7V7 166 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 LMO1P25800 156 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 ERVK11-1P61568 191 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 TMEM187Q14656 261 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 JOSD1Q15040 202 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-201ENST00000380829 CBLN4Q9NTU7 201 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 KIR2DS1A0A191URI9 304 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 NPSP0C0P6 89 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 KIR2DS4P43632 304 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 ZNF83P51522 516 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 UCP3P55916 312 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 KIR2DS1Q14954 304 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 SRSF7Q16629 238 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLCN4-201ENST00000380829 Q6ZR03 302 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 CYB561D1Q8N8Q1 229 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 NOL4LQ96MY1 436 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-201ENST00000380829 GPHA2Q96T91 129 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 ARV1Q9H2C2 271 aa12.03□□□□□ -0.48
CLCN4-201ENST00000380829 IGKV1D-13A0A0B4J2D9 117 aa12.02□□□□□ -0.48
CLCN4-201ENST00000380829 DIRAS3O95661 229 aa12.02□□□□□ -0.48
CLCN4-201ENST00000380829 AMBPP02760 352 aa12.02□□□□□ -0.48
CLCN4-201ENST00000380829 IGKV1-13P0DP09 117 aa12.02□□□□□ -0.48
CLCN4-201ENST00000380829 GNRHRP30968 328 aa12.02□□□□□ -0.48
CLCN4-201ENST00000380829 CEBPDP49716 269 aaPredicted RBP12.02□□□□□ -0.48
CLCN4-201ENST00000380829 SPIN3Q5JUX0 258 aa12.02□□□□□ -0.48
CLCN4-201ENST00000380829 PRAMEF6Q5VXH4 476 aa12.02□□□□□ -0.48
CLCN4-201ENST00000380829 ZNF429Q86V71 674 aa12.02□□□□□ -0.48
CLCN4-201ENST00000380829 Q8IYB0 196 aa12.02□□□□□ -0.48
CLCN4-201ENST00000380829 HEATR1Q9H583 2144 aaKnown RBP12.02□□□□□ -0.48
CLCN4-201ENST00000380829 SLC33A1O00400 549 aaPredicted RBP12.02□□□□□ -0.49
CLCN4-201ENST00000380829 WNT9BO14905 357 aa12.02□□□□□ -0.49
CLCN4-201ENST00000380829 PHF1O43189 567 aaPredicted RBP12.02□□□□□ -0.49
CLCN4-201ENST00000380829 GCH1P30793 250 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms