RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 AP4M1O00189 453 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 RBMXL2O75526 392 aaKnown RBP3.63□□□□□ -1.83
C9orf72-203ENST00000380003 HLA-AP01891 365 aaKnown RBP3.63□□□□□ -1.83
C9orf72-203ENST00000380003 EDN2P20800 178 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 VDAC1P21796 283 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 C22orf42Q6IC83 251 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 LIN54Q6MZP7 749 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 OR8H3Q8N146 312 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 SVOPQ8N4V2 548 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 ARPC1AQ92747 370 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 DLX4Q92988 240 aaPredicted RBP3.63□□□□□ -1.83
C9orf72-203ENST00000380003 CPNE2Q96FN4 548 aaPredicted RBP3.63□□□□□ -1.83
C9orf72-203ENST00000380003 NABP2Q9BQ15 211 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 RSRP1Q9BUV0 290 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 MND1Q9BWT6 205 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 LINC00574Q9H8X3 128 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 IL36GQ9NZH8 169 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 SCOCQ9UIL1 159 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 SLC25A17O43808 307 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 ORC5O43913 435 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 TRBV12-3P01733 135 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 RPS27AP62979 156 aaKnown RBP3.63□□□□□ -1.83
C9orf72-203ENST00000380003 SLC35B1P78383 322 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 CX3CL1P78423 397 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 ZNF816Q0VGE8 651 aaPredicted RBP3.63□□□□□ -1.83
C9orf72-203ENST00000380003 SSX1Q16384 188 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 MGLLQ99685 303 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 AGMATQ9BSE5 352 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 C11orf54Q9H0W9 315 aaPredicted RBP3.63□□□□□ -1.83
C9orf72-203ENST00000380003 CST11Q9H112 138 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 ZC4H2Q9NQZ6 224 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 MBNL3Q9NUK0 354 aaKnown RBP3.63□□□□□ -1.83
C9orf72-203ENST00000380003 LIN7CQ9NUP9 197 aaKnown RBP3.63□□□□□ -1.83
C9orf72-203ENST00000380003 FKBP14Q9NWM8 211 aa3.63□□□□□ -1.83
C9orf72-203ENST00000380003 DNAH7Q8WXX0 4024 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 M0QZK8 103 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 SAP30O75446 220 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 GSTT2P0CG29 244 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 GSTT2BP0CG30 244 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 RPA2P15927 270 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 FSTP19883 344 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 CRHBPP24387 322 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 PSMB8P28062 276 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 RAB9AP51151 201 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 QRFPP83859 136 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 MRPL28Q13084 256 aaKnown RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 MED21Q13503 144 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 CXorf66Q5JRM2 361 aaPredicted RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 NHLRC3Q5JS37 347 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 TMEM65Q6PI78 240 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 ZNF383Q8NA42 475 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 FBLIM1Q8WUP2 373 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 DCUN1D4Q92564 292 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 UFD1Q92890 307 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 CNOT2Q9NZN8 540 aaKnown RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 KIAA1456Q9P272 454 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 SPATA2Q9UM82 520 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 IGHV4OR15-8A0A075B7B6 117 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 A0A087WW49 117 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 MEIS3P1A6NDR6 274 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 SRRM4A7MD48 611 aaKnown RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 CASQ2O14958 399 aaPredicted RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 NBR2O15453 112 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 FGF16O43320 207 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 RGS10O43665 173 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 SC5DO75845 299 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 CA2P00918 260 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 IGHV3-23P01764 117 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 MYOD1P15172 320 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 NFYAP23511 347 aaPredicted RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 PPIFP30405 207 aaKnown RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 KIAA0141Q14154 515 aaPredicted RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 GPR176Q14439 515 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 Q3ZCU0 254 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 VAX1Q5SQQ9 334 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 C10orf55Q5SWW7 151 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 GLT8D1Q68CQ7 371 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 DPF1Q92782 380 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 FAM3DQ96BQ1 224 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 C5orf30Q96GV9 206 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 RCC1LQ96I51 464 aaKnown RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 CHCHD6Q9BRQ6 235 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 ST6GALNAC5Q9BVH7 336 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 IFT22Q9H7X7 185 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 SEBOXQ9HB31 216 aaPredicted RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 SCN3BQ9NY72 215 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 RDH8Q9NYR8 311 aa3.62□□□□□ -1.83
C9orf72-203ENST00000380003 METTL1Q9UBP6 276 aaKnown RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 RBM7Q9Y580 266 aaKnown RBP3.62□□□□□ -1.83
C9orf72-203ENST00000380003 TRAV41A0A0B4J266 112 aa3.61□□□□□ -1.83
C9orf72-203ENST00000380003 IGHV3-35A0A0C4DH35 117 aa3.61□□□□□ -1.83
C9orf72-203ENST00000380003 TMEM272A0A1B0GTI8 110 aa3.61□□□□□ -1.83
C9orf72-203ENST00000380003 TMEM14DPA8MWL7 114 aa3.61□□□□□ -1.83
C9orf72-203ENST00000380003 M0R1X1 148 aa3.61□□□□□ -1.83
C9orf72-203ENST00000380003 SLC22A1O15245 554 aa3.61□□□□□ -1.83
C9orf72-203ENST00000380003 TNFSF12O43508 249 aa3.61□□□□□ -1.83
C9orf72-203ENST00000380003 NAPSAO96009 420 aa3.61□□□□□ -1.83
C9orf72-203ENST00000380003 CLEC2LP0C7M8 214 aa3.61□□□□□ -1.83
C9orf72-203ENST00000380003 EGR2P11161 476 aaPredicted RBP3.61□□□□□ -1.83
C9orf72-203ENST00000380003 CD1BP29016 333 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms