RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 CD55P08174 381 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 SCTP09683 121 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 PPP1CCP36873 323 aaKnown RBP6.46□□□□□ -1.37
CDKL5-202ENST00000379996 EIF4EBP1Q13541 118 aaPredicted RBP6.46□□□□□ -1.37
CDKL5-202ENST00000379996 MPV17LQ2QL34 196 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 ZNF718Q3SXZ3 478 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 PLCXD3Q63HM9 321 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 LINC00596Q86U02 117 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 OR5D13Q8NGL4 314 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 KLF14Q8TD94 323 aaPredicted RBP6.46□□□□□ -1.37
CDKL5-202ENST00000379996 TOMM40LQ969M1 308 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 DIRC2Q96SL1 478 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 SMIM3Q9BZL3 60 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 CHD3Q12873 2000 aaKnown RBP6.46□□□□□ -1.37
CDKL5-202ENST00000379996 PIEZO2Q9H5I5 2752 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 TRAV24A0A0B4J272 114 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 PPIHO43447 177 aaKnown RBP6.46□□□□□ -1.38
CDKL5-202ENST00000379996 IGKV1-39P01597 117 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 IGKV1D-39P04432 117 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 IFNA4P05014 189 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 SLC25A6P12236 298 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 CCL20P78556 96 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 FAM76BQ5HYJ3 339 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 C1QL4Q86Z23 238 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 FOXRED2Q8IWF2 684 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 SLC25A40Q8TBP6 338 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 OR5P3Q8WZ94 311 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 SMDT1Q9H4I9 107 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 ZC4H2Q9NQZ6 224 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 H0Y980 276 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 ST8SIA3O43173 380 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 EIF3GO75821 320 aaKnown RBP eCLIP6.46□□□□□ -1.38
CDKL5-202ENST00000379996 B2MP61769 119 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 PRDX4Q13162 271 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 PEA15Q15121 130 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 ZNF672Q499Z4 452 aaPredicted RBP6.46□□□□□ -1.38
CDKL5-202ENST00000379996 Q6P435 159 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 SLC25A26Q70HW3 274 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 MRPL21Q7Z2W9 205 aaKnown RBP6.46□□□□□ -1.38
CDKL5-202ENST00000379996 OR56B2PQ8NGI1 322 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 OR1J1Q8NGS3 322 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 SFT2D1Q8WV19 159 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 CCDC140Q96MF4 163 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 ABHD14AQ9BUJ0 271 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 ELL3Q9HB65 397 aaPredicted RBP6.46□□□□□ -1.38
CDKL5-202ENST00000379996 SMCO4Q9NRQ5 59 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 KCNIP3Q9Y2W7 256 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 ATP23Q9Y6H3 246 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 TANC2Q9HCD6 1990 aa6.46□□□□□ -1.38
CDKL5-202ENST00000379996 C7orf77A4D0Y5 90 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 TMEM210A6NLX4 147 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 CD300LBA8K4G0 201 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 PHF1O43189 567 aaPredicted RBP6.45□□□□□ -1.38
CDKL5-202ENST00000379996 PRKACAP17612 351 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 FXYD4P59646 89 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 SRPXP78539 464 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 MZT1Q08AG7 82 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 H1FOOQ8IZA3 346 aaPredicted RBP6.45□□□□□ -1.38
CDKL5-202ENST00000379996 OR2C3Q8N628 320 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 SLAMF9Q96A28 289 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 C7orf69Q9H7B7 122 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 BIN3Q9NQY0 253 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.45□□□□□ -1.38
CDKL5-202ENST00000379996 OR5B21A6NL26 309 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 HSD17B6O14756 317 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 PHOX2AO14813 284 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 P0C879 139 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 CCL2P13500 99 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 ERVK11-1P61568 191 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 PSG7Q13046 419 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 RHEBQ15382 184 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 WDR86Q86TI4 376 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 CCDC71LQ8N9Z2 235 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 OR5A2Q8NGI9 324 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 IGFBPL1Q8WX77 278 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 OR2J1Q9GZK6 312 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 PLK3Q9H4B4 646 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 CDC42EP3Q9UKI2 254 aa6.45□□□□□ -1.38
CDKL5-202ENST00000379996 C19orf84I3L1E1 186 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 FSTL3O95633 263 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 ATP6V0CP27449 155 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 CD200P41217 278 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 GATA4P43694 442 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 TLE4Q04727 773 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 SMCO1Q147U7 214 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 CXorf66Q5JRM2 361 aaPredicted RBP6.44□□□□□ -1.38
CDKL5-202ENST00000379996 TMEM252Q8N6L7 170 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 PIGCQ92535 297 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 C14orf79Q96F83 325 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 CFAP46Q8IYW2 2715 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 TRAV1-1A0A0B4J248 108 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 FAM24AA6NFZ4 105 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 A6NNC1 897 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 AGPAT2O15120 278 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 SYNGR1O43759 233 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 MT-ND4LP03901 98 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 RNF224P0DH78 156 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 APOBEC3AP31941 199 aaPredicted RBP6.44□□□□□ -1.38
CDKL5-202ENST00000379996 MEOX2P50222 304 aa6.44□□□□□ -1.38
CDKL5-202ENST00000379996 PPOXP50336 477 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms