RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 MEF2BQ02080 365 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF74Q16587 644 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 CEACAM21Q3KPI0 293 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 LCN12Q6JVE5 192 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 PLEKHF2Q9H8W4 249 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 HIF1ANQ9NWT6 349 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 DNAJB12Q9NXW2 375 aaKnown RBP6.39□□□□□ -1.39
CDKL5-201ENST00000379989 SS18L2Q9UHA2 77 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 A0A1B0GX78 115 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 M0R1X1 148 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 CD5LO43866 347 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 TMEM50BP56557 158 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 CHRDL1Q9BU40 450 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 RTN4RQ9BZR6 473 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 FAM60AQ9NP50 221 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 MYO7AQ13402 2215 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 TRAV9-2A0A087WT02 112 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 TMEM14DPA8MWL7 114 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 KLRC4-KLRK1H3BQV0 150 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF737O75373 536 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 AGFG2O95081 481 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 C1QTNF9P0C862 333 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 GATA2P23769 480 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-201ENST00000379989 SNU13P55769 128 aaKnown RBP6.38□□□□□ -1.39
CDKL5-201ENST00000379989 FOXL1Q12952 345 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 STUMQ69YW2 141 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 SLC18B1Q6NT16 456 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 Q6ZS52 159 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 OR10V1Q8NGI7 309 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 OR4A5Q8NH83 315 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 C18orf12Q96KH6 178 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 SIGLEC12Q96PQ1 595 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 NRTNQ99748 197 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 COPS7AQ9UBW8 275 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 CEP192Q8TEP8 1941 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 CGAP01215 116 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 SMIM17P0DL12 118 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 GLI4P10075 376 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 PMCHP20382 165 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 FBLP22087 321 aaKnown RBP6.38□□□□□ -1.39
CDKL5-201ENST00000379989 GATA3P23771 443 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 CD1BP29016 333 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 PSG4Q00888 419 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 HSD52Q0P140 79 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF154Q13106 437 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 FNDC7Q5VTL7 733 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 C9orf135Q5VTT2 229 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 RHBDD2Q6NTF9 364 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 IGF2-ASQ6U949 168 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 OR2AE1Q8NHA4 323 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 SLC25A40Q8TBP6 338 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 PECRQ9BY49 303 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 MRPL18Q9H0U6 180 aaKnown RBP6.38□□□□□ -1.39
CDKL5-201ENST00000379989 GNB4Q9HAV0 340 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 C19orf25Q9UFG5 118 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-201ENST00000379989 ADAMTS9Q9P2N4 1935 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 TNRC6BQ9UPQ9 1833 aaKnown RBP6.38□□□□□ -1.39
CDKL5-201ENST00000379989 TMEM250H0YL14 139 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 IGKV3-11P04433 115 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF883P0CG24 379 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 TAS2R46P59540 309 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 TMEM249Q2WGJ8 235 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 RNFT1Q5M7Z0 435 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 TSPO2Q5TGU0 170 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF788Q6ZQV5 615 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 OTOSQ8NHW6 89 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 KCNG3Q8TAE7 436 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 MRPL30Q8TCC3 161 aaKnown RBP6.38□□□□□ -1.39
CDKL5-201ENST00000379989 ST6GALNAC6Q969X2 333 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 MRAP2Q96G30 205 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 ABHD17AQ96GS6 310 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 LIN37Q96GY3 246 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-201ENST00000379989 ARHGAP5-AS1Q96IT6 56 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 FOXN4Q96NZ1 517 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 FAM110AQ9BQ89 295 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 FNDC4Q9H6D8 234 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-201ENST00000379989 POLR1DQ9Y2S0 133 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 TMEM14AQ9Y6G1 99 aa6.38□□□□□ -1.39
CDKL5-201ENST00000379989 TDRD6O60522 2096 aaKnown RBP6.37□□□□□ -1.39
CDKL5-201ENST00000379989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.37□□□□□ -1.39
CDKL5-201ENST00000379989 A0A1W2PS18 150 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 FAM231BA6NCW3 169 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 K7ESF4 209 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 SLC33A1O00400 549 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-201ENST00000379989 SNRNP200O75643 2136 aaKnown RBP6.37□□□□□ -1.39
CDKL5-201ENST00000379989 S1PR2O95136 353 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 CA2P00918 260 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 IFNA1P01562 189 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 ZNF728P0DKX0 622 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 RRADP55042 308 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 PIGPP57054 158 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 PLP1P60201 277 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 RPS4XP62701 263 aaKnown RBP6.37□□□□□ -1.39
CDKL5-201ENST00000379989 FMODQ06828 376 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 PMCHL1Q16048 86 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 RNF144BQ7Z419 303 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 LRTM2Q8N967 370 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 OR10P1Q8NGE3 313 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 SGMS2Q8NHU3 365 aa6.37□□□□□ -1.39
CDKL5-201ENST00000379989 FER1L6-AS2Q96M78 137 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms