RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 C5orf63A6NC05 138 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 K7EQM0 130 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 NAT2P11245 290 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 CD59P13987 128 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 ZIC4Q8N9L1 334 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 RAB1CQ92928 201 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 ADTRPQ96IZ2 230 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 LYZL4Q96KX0 146 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 SSTR5P35346 364 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FHITP49789 147 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 CLDN18P56856 261 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM78BQ5VT40 261 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 SLC25A10Q9UBX3 287 aaPredicted RBP11.28□□□□□ -0.6
NPHP4-203ENST00000378169 PPIAL4EA0A075B759 164 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 IGHV3-72A0A0B4J1Y9 119 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A10PA6NDY2 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A18PA6NE21 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A16PA6NEW6 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A20PA6NIJ5 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A8PA6NJQ4 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A7PA6NKC0 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A22PA8MWA6 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A12PA8MX19 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A5PA8MXJ8 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A23PA8MXZ1 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 PPIAL4DF5H284 164 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 H0Y980 276 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A15PP0C7V4 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A13PP0C7W8 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A14PP0C7W9 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM90A24PP0C7X0 464 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 CT45A10P0DMU9 189 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 PPIAL4FP0DN26 164 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 HKR1P10072 659 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FAM27E3Q08E93 113 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 ZNRF1Q8ND25 227 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 SLC25A28Q96A46 364 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 GPR146Q96CH1 333 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 GINS3Q9BRX5 216 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 REPIN1Q9BWE0 567 aaKnown RBP11.28□□□□□ -0.6
NPHP4-203ENST00000378169 PPIAL4AQ9Y536 164 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 NPTNQ9Y639 398 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 ODAMA1E959 279 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 CECR9P0C854 216 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 DEFA6Q01524 100 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 RTP5Q14D33 572 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 ATP6V1FQ16864 119 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 KHDC1LQ5JSQ8 128 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 ZNF66Q6ZN08 573 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 OR5P3Q8WZ94 311 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 TMEM45BQ96B21 275 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 ABHD14AQ9BUJ0 271 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 RAB1BQ9H0U4 201 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 PTPRQQ9UMZ3 2332 aa11.28□□□□□ -0.6
NPHP4-203ENST00000378169 FHL1Q13642 323 aa11.27□□□□□ -0.6
NPHP4-203ENST00000378169 KRTCAP3Q53RY4 240 aa11.27□□□□□ -0.6
NPHP4-203ENST00000378169 NHLRC3Q5JS37 347 aa11.27□□□□□ -0.6
NPHP4-203ENST00000378169 RNF144BQ7Z419 303 aa11.27□□□□□ -0.6
NPHP4-203ENST00000378169 BLNKQ8WV28 456 aa11.27□□□□□ -0.6
NPHP4-203ENST00000378169 RSRP1Q9BUV0 290 aa11.27□□□□□ -0.6
NPHP4-203ENST00000378169 ZDHHC11Q9H8X9 412 aa11.27□□□□□ -0.6
NPHP4-203ENST00000378169 PARP11Q9NR21 331 aa11.27□□□□□ -0.6
NPHP4-203ENST00000378169 CYB5R3P00387 301 aaPredicted RBP11.27□□□□□ -0.61
NPHP4-203ENST00000378169 PTGDSP41222 190 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 FAM201AQ5SY85 155 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 KDF1Q8NAX2 398 aaPredicted RBP11.27□□□□□ -0.61
NPHP4-203ENST00000378169 ZBTB34Q8NCN2 500 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 ZNF524Q96C55 264 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 NRIP2Q9BQI9 281 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 NUDT16L1Q9BRJ7 211 aaKnown RBP11.27□□□□□ -0.61
NPHP4-203ENST00000378169 SEC11CQ9BY50 192 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 HSBP1L1C9JCN9 74 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 PROB1E7EW31 1015 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 NPY1RP25929 384 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 RHOBP62745 196 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 H3F3AP84243 136 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 PSG7Q13046 419 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 CTSSP25774 331 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 CSN1S1P47710 185 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 SULT1A2P50226 295 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 PRRX1P54821 245 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 LPAR2Q9HBW0 351 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 INSIG2Q9Y5U4 225 aa11.27□□□□□ -0.61
NPHP4-203ENST00000378169 GTF3C1Q12789 2109 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 J3QR06 171 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 PAGE4O60829 102 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 OR4A8P0C604 315 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 STPG2Q8N412 459 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 FLYWCH2Q96CP2 140 aaKnown RBP11.26□□□□□ -0.61
NPHP4-203ENST00000378169 AP1S3Q96PC3 154 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 AQP10Q96PS8 301 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 C1QTNF5Q9BXJ0 243 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 HTTP42858 3142 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 IGHV3-21A0A0B4J1V1 117 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 S100A7P31151 101 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 PUSL1Q8N0Z8 303 aaKnown RBP11.26□□□□□ -0.61
NPHP4-203ENST00000378169 OR4P4Q8NGL7 312 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 NEIL1Q96FI4 390 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-203ENST00000378169 TM2D1Q9BX74 207 aa11.26□□□□□ -0.61
NPHP4-203ENST00000378169 FKBP11Q9NYL4 201 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms