RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 OR8B12Q8NGG6 310 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 ZNRF4Q8WWF5 429 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 CACNG8Q8WXS5 425 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 NAA38Q9BRA0 125 aaKnown RBP10.21□□□□□ -0.78
NPHP4-202ENST00000378161 GP6Q9HCN6 339 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 MRM2Q9UI43 246 aaKnown RBP10.21□□□□□ -0.78
NPHP4-202ENST00000378161 ICAM5Q9UMF0 924 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 TMED7-TICAM2A0A0A6YYA0 188 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 OR11H12B2RN74 326 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 CD55P08174 381 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 C3orf79P0CE67 100 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 TMEM97Q5BJF2 176 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 LIAT1Q6ZQX7 453 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 OR11H1Q8NG94 326 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 OR11H2Q8NH07 326 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 RBM11P57052 281 aaKnown RBP10.2□□□□□ -0.78
NPHP4-202ENST00000378161 RNFT1Q5M7Z0 435 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 C9orf40Q8IXQ3 194 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 BAHD1Q8TBE0 780 aaPredicted RBP10.2□□□□□ -0.78
NPHP4-202ENST00000378161 WFDC6Q9BQY6 131 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 FBXL7Q9UJT9 491 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 SLC17A4Q9Y2C5 497 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 PXMP4Q9Y6I8 212 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 TRBV5-5A0A0J9YX44 114 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 ANKRD30BLA7E2S9 258 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 CCL2P13500 99 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 TCTAP57738 103 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 RPL27P61353 136 aaKnown RBP10.2□□□□□ -0.78
NPHP4-202ENST00000378161 SRSF7Q16629 238 aaKnown RBP eCLIP10.2□□□□□ -0.78
NPHP4-202ENST00000378161 PDLIM3Q53GG5 364 aaPredicted RBP10.2□□□□□ -0.78
NPHP4-202ENST00000378161 LHFPL2Q6ZUX7 228 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 ATG4DQ86TL0 474 aaPredicted RBP10.2□□□□□ -0.78
NPHP4-202ENST00000378161 OR10D3Q8NH80 312 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.2□□□□□ -0.78
NPHP4-202ENST00000378161 LILRA1O75019 489 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 IGHG1P01857 330 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 GPX1P07203 203 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 MRPS21P82921 87 aaKnown RBP10.2□□□□□ -0.78
NPHP4-202ENST00000378161 GGTLC2Q14390 218 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 FAM69BQ5VUD6 431 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 PPP1R35Q8TAP8 253 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 SLC37A2Q8TED4 501 aa10.2□□□□□ -0.78
NPHP4-202ENST00000378161 RGPD3A6NKT7 1758 aaPredicted RBP10.19□□□□□ -0.78
NPHP4-202ENST00000378161 RGPD4Q7Z3J3 1758 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 HLA-DQA1P01909 254 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 SERF2P84101 59 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 OR1L3Q8NH93 324 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 SPTSSAQ969W0 71 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 MRPL13Q9BYD1 178 aaKnown RBP10.19□□□□□ -0.78
NPHP4-202ENST00000378161 OR7C1O76099 320 aaPredicted RBP10.19□□□□□ -0.78
NPHP4-202ENST00000378161 CA7P43166 264 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 RPL18Q07020 188 aaKnown RBP10.19□□□□□ -0.78
NPHP4-202ENST00000378161 SPANXN5Q5MJ07 72 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 ADAMTSL5Q6ZMM2 481 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 COX14Q96I36 57 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 B4GALT7Q9UBV7 327 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 PLXNB2O15031 1838 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 DOCK3Q8IZD9 2030 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 SNCGO76070 127 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 NKX2-2O95096 273 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 MFAP4P55083 255 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 DLX2Q07687 328 aaPredicted RBP10.19□□□□□ -0.78
NPHP4-202ENST00000378161 ZIC1Q15915 447 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 CA13Q8N1Q1 262 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 DEFB125Q8N687 156 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 BCORP1Q8N888 145 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 KISS1RQ969F8 398 aaPredicted RBP10.19□□□□□ -0.78
NPHP4-202ENST00000378161 FER1L6-AS2Q96M78 137 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 OBP2BQ9NPH6 170 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 HILPDAQ9Y5L2 63 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 DOCK8Q8NF50 2099 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 J3QR06 171 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 K7EP34 96 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 SH2D1BO14796 132 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 DEGS1O15121 323 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 ADAM20O43506 726 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 ZNF217O75362 1048 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 HLA-DRB1P01911 266 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 THY1P04216 161 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 CISD3P0C7P0 127 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 FAM90A2PQ658T7 463 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 SSX8Q7RTT4 187 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 OR8B2Q96RD0 313 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 WFDC1Q9HC57 220 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 PLA2G3Q9NZ20 509 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 PSENENQ9NZ42 101 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 SEC16AO15027 2179 aa10.19□□□□□ -0.78
NPHP4-202ENST00000378161 SPTBP11277 2137 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 SHISA7A6NL88 538 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 ZGLP1P0C6A0 271 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 IGLC1P0CG04 106 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 EMDP50402 254 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 C1orf140Q5VVS0 124 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 MARCH3Q86UD3 253 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 SH2D2AQ9NP31 389 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 RPRMQ9NS64 109 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 MRPL27Q9P0M9 148 aaKnown RBP10.18□□□□□ -0.78
NPHP4-202ENST00000378161 UBE2L5PA0A1B0GUS4 154 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 TIMM23BQ5SRD1 257 aa10.18□□□□□ -0.78
NPHP4-202ENST00000378161 LCN12Q6JVE5 192 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms