RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 GRAMD2BQ96HH9 432 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 RAB29O14966 203 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 LOXL3P58215 753 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 COX19Q49B96 90 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 ZNF343Q6P1L6 599 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 GDF15Q99988 308 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 ALX4Q9H161 411 aaPredicted RBP10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 ANKRD31Q8N7Z5 1873 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 TMSB15BA0A087X1C1 80 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 TRAV38-1A0A0B4J264 116 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 ISLRO14498 428 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 COL10A1Q03692 680 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 WDFY1Q8IWB7 410 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 TMEM105Q8N8V8 129 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 TRPM6Q9BX84 2022 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 OR2T8A6NH00 312 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 LIMS1P48059 325 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 PAFAH1B2P68402 229 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 ADAMTS17Q8TE56 1095 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 OTOFQ9HC10 1997 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 CDS2O95674 445 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 COL8A1P27658 744 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 RBM11P57052 281 aaKnown RBP10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 TAS2R60P59551 318 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 FUT5Q11128 374 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 SCGB1D4Q6XE38 83 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 H1FOOQ8IZA3 346 aaPredicted RBP10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 ADTRPQ96IZ2 230 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 MRPL37Q9BZE1 423 aaKnown RBP10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 IL36RNQ9UBH0 155 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 FCARP24071 287 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 PDLIM4P50479 330 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 CCL8P80075 99 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 LINC00596Q86U02 117 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 DOLPP1Q86YN1 238 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 OR51B2Q9Y5P1 312 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 A0A1B0GV90 55 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 ORM1P02763 201 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 MMP16P51512 607 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 GFRA1P56159 465 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 SLC35B1P78383 322 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 TEX29Q8N6K0 151 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 PGLYRP3Q96LB9 341 aa10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 DIDO1Q9BTC0 2240 aaKnown RBP10.4□□□□□ -0.74
PCDHA9-201ENST00000378122 UBE2L6O14933 153 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 CEACAM1P13688 526 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 PRNTQ86SH4 94 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 ZNF519Q8TB69 540 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 OR4C12Q96R67 309 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 RSG1Q9BU20 258 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 MCM3APO60318 1980 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 CA2P00918 260 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 GCGP01275 180 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 CD1AP06126 327 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 ASAH2BP0C7U1 165 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 NHLRC3Q5JS37 347 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 SLC25A40Q8TBP6 338 aa10.4□□□□□ -0.75
PCDHA9-201ENST00000378122 CORTO00230 105 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 WDR74Q6RFH5 385 aaPredicted RBP10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 OR1L1Q8NH94 360 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 LOC105371267A0A1B0GV96 52 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 Q5BKY6 102 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 ABHD17AQ96GS6 310 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 FOXC2Q99958 501 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 SH3BGRL3Q9H299 93 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 SLC25A17O43808 307 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 GCM2O75603 506 aaPredicted RBP10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 DDTP30046 118 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 CLDN18P56856 261 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 WDR25Q64LD2 544 aaPredicted RBP10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 TEPPQ6URK8 271 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 ZNF385AQ96PM9 386 aaKnown RBP10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 NMUP48645 174 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 OR52L2PQ8NGH6 319 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 COL5A3P25940 1745 aaPredicted RBP10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 C1QL1O75973 258 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 PPP1CCP36873 323 aaKnown RBP10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 ZXDCQ2QGD7 858 aaPredicted RBP10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 TMEM74BQ9NUR3 256 aa10.39□□□□□ -0.75
PCDHA9-201ENST00000378122 COL11A1P12107 1806 aaPredicted RBP10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 IGKV1-8A0A0C4DH67 115 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 MELTFP08582 738 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 HIST1H1BP16401 226 aaKnown RBP10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 KRTCAP3Q53RY4 240 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 CARFQ8N187 725 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 AMELYQ99218 206 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 TLNRD1Q9H1K6 362 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 RTTNQ86VV8 2226 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 TGFAP01135 160 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 SGMS2Q8NHU3 365 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 PTX4Q96A99 478 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 TDRD15B5MCY1 1934 aaKnown RBP10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 TRBV5-5A0A0J9YX44 114 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 H2BFSP57053 126 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 CFHR1Q03591 330 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 PILRBQ9UKJ0 227 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 FAM216AQ8WUB2 273 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 A0A1W2PP11 408 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 FOXS1O43638 330 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 HERVK_113P61574 105 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms