RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 LMX1BO60663 402 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 COX5BP10606 129 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 CBLN2Q8IUK8 224 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 SHISA5Q8N114 240 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 SIRT7Q9NRC8 400 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 MYO16Q9Y6X6 1858 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 SPTBN1Q01082 2364 aaKnown RBP15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 SNAI3Q3KNW1 292 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 SLC25A38Q96DW6 304 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 SCN10AQ9Y5Y9 1956 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 IGHV3-21A0A0B4J1V1 117 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 MMP9P14780 707 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 PAFAH1B2P68402 229 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 DCAF12L2Q5VW00 463 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 MRPL54Q6P161 138 aaKnown RBP15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 STARD4Q96DR4 205 aa15.35■□□□□ 0.05
CNTNAP3-204ENST00000377656 WNT5AP41221 380 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 TMEM116Q8NCL8 245 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 PIN1P1O15428 100 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 HYPMO75409 117 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 HIST1H1EP10412 219 aaKnown RBP15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 HLA-DRB5Q30154 266 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 DPPA3Q6W0C5 159 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 H1FOOQ8IZA3 346 aaPredicted RBP15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 NDUFA2O43678 99 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 TIAF1O95411 115 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 LINC01590Q5TEZ4 76 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 PRDM14Q9GZV8 571 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 PRDM6Q9NQX0 595 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 DLL3Q9NYJ7 618 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 HSF4Q9ULV5 492 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 SDK2Q58EX2 2172 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 J3KRW8 73 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 FDX2Q6P4F2 183 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 RSRP1Q9BUV0 290 aa15.34■□□□□ 0.05
CNTNAP3-204ENST00000377656 ODAMA1E959 279 aa15.33■□□□□ 0.05
CNTNAP3-204ENST00000377656 M0R2Z0 102 aa15.33■□□□□ 0.05
CNTNAP3-204ENST00000377656 CD40P25942 277 aa15.33■□□□□ 0.05
CNTNAP3-204ENST00000377656 ID4P47928 161 aa15.33■□□□□ 0.05
CNTNAP3-204ENST00000377656 MS4A7Q9GZW8 240 aaPredicted RBP15.33■□□□□ 0.05
CNTNAP3-204ENST00000377656 ESPL1Q14674 2120 aa15.33■□□□□ 0.05
CNTNAP3-204ENST00000377656 NPIPB13A6NJU9 1138 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 NPIPB4C9JG80 1138 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 SMPD2O60906 423 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 RCC1P18754 421 aaPredicted RBP15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 RUNX1Q01196 453 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 RBPMS2Q6ZRY4 209 aaKnown RBP15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 HILPDAQ9Y5L2 63 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 HTN1P15515 57 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 LDLRAD3Q86YD5 345 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 LRRC75AQ8NAA5 344 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 SNRNP40Q96DI7 357 aaKnown RBP15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 SRXN1Q9BYN0 137 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 HIGD1AQ9Y241 93 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 PIKFYVEQ9Y2I7 2098 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 ELOA3CA0A087WX78 387 aaPredicted RBP15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 IFITM2Q01629 132 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 TUSC1Q2TAM9 212 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 TMEM97Q5BJF2 176 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 PPP1R32Q7Z5V6 425 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 LRP11Q86VZ4 500 aa15.33■□□□□ 0.04
CNTNAP3-204ENST00000377656 TRAV34A0A0B4J273 112 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 IFNL4K9M1U5 179 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 MPDU1O75352 247 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 ATP1A1-AS1Q5TC04 95 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 UNQ9370/PRO34162Q6UXP9 181 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 OR1L6Q8NGR2 347 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 KLF14Q8TD94 323 aaPredicted RBP15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 PAXXQ9BUH6 204 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 TMEM191AQ9H0A3 160 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 DOPEY2Q9Y3R5 2298 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 NCOR1O75376 2440 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 IGHV3-72A0A0B4J1Y9 119 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 MELTFP08582 738 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 RPL29P47914 159 aaKnown RBP15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 SMDT1Q9H4I9 107 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 MFSD2BA6NFX1 497 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 ELOBQ15370 118 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 OR5AC2Q9NZP5 309 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 SELENOTP62341 195 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 CALHM1Q8IU99 346 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 MMD2Q8IY49 270 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 ZNF645Q8N7E2 425 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 AQP3Q92482 292 aa15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 GSX1Q9H4S2 264 aaPredicted RBP15.32■□□□□ 0.04
CNTNAP3-204ENST00000377656 OR10J1P30954 320 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 HOXA6P31267 233 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 WNT5BQ9H1J7 359 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 CEACAM18A8MTB9 384 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 P2RY4P51582 365 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 RPL8P62917 257 aaKnown RBP15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 EGR4Q05215 589 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 SAXO1Q8IYX7 474 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 DYNLRB2Q8TF09 96 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 P2RX4Q99571 388 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 IFT22Q9H7X7 185 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 G6PC2Q9NQR9 355 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 PXMP4Q9Y6I8 212 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 ABCA7Q8IZY2 2146 aa15.31■□□□□ 0.04
CNTNAP3-204ENST00000377656 DEDDO75618 318 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms