RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 P2RX4Q99571 388 aa11.15□□□□□ -0.62
ACTN1-202ENST00000376839 USF3Q68DE3 2245 aa11.15□□□□□ -0.62
ACTN1-202ENST00000376839 ELOA3CA0A087WX78 387 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-202ENST00000376839 LY86O95711 162 aa11.15□□□□□ -0.62
ACTN1-202ENST00000376839 CLDN1O95832 211 aa11.15□□□□□ -0.62
ACTN1-202ENST00000376839 CELA3BP08861 270 aa11.15□□□□□ -0.62
ACTN1-202ENST00000376839 HOXA4Q00056 320 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-202ENST00000376839 PLGLB1Q02325 96 aa11.15□□□□□ -0.62
ACTN1-202ENST00000376839 ACSM6Q6P461 480 aa11.15□□□□□ -0.62
ACTN1-202ENST00000376839 MOB1BQ7L9L4 216 aa11.15□□□□□ -0.62
ACTN1-202ENST00000376839 MCEMP1Q8IX19 187 aa11.15□□□□□ -0.62
ACTN1-202ENST00000376839 LHX4Q969G2 390 aa11.15□□□□□ -0.62
ACTN1-202ENST00000376839 GP6Q9HCN6 339 aa11.15□□□□□ -0.62
ACTN1-202ENST00000376839 PRRC2CQ9Y520 2896 aaKnown RBP11.15□□□□□ -0.63
ACTN1-202ENST00000376839 TRBV24-1A0A075B6N3 115 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 C9orf172C9J069 976 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 PTBP3O95758 552 aaKnown RBP11.14□□□□□ -0.63
ACTN1-202ENST00000376839 ERVS71-1P61550 626 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 ADIRFQ15847 76 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 ALKBH6Q3KRA9 238 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 ACSF3Q4G176 576 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-202ENST00000376839 TMEM14EPQ6UXP3 125 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 SMIM7Q9BQ49 75 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 SLC25A22Q9H936 323 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 FOXJ2Q9P0K8 574 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 DOCK11Q5JSL3 2073 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 CDIPTO14735 213 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 GATCO43716 136 aaKnown RBP11.14□□□□□ -0.63
ACTN1-202ENST00000376839 HIST1H1BP16401 226 aaKnown RBP11.14□□□□□ -0.63
ACTN1-202ENST00000376839 ERVK11-1P61568 191 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 RPS16P62249 146 aaKnown RBP11.14□□□□□ -0.63
ACTN1-202ENST00000376839 GAMTQ14353 236 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 NECAP1Q8NC96 275 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 BCL2L2Q92843 193 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-202ENST00000376839 PINX1Q96BK5 328 aaKnown RBP11.14□□□□□ -0.63
ACTN1-202ENST00000376839 C5orf30Q96GV9 206 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 RHOVQ96L33 236 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 RTL8AQ9BWD3 113 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 STRADBQ9C0K7 418 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 MBNL3Q9NUK0 354 aaKnown RBP11.14□□□□□ -0.63
ACTN1-202ENST00000376839 SLC39A9Q9NUM3 307 aa11.14□□□□□ -0.63
ACTN1-202ENST00000376839 OPN1MWP04001 364 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 OPN1MW2P0DN77 364 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 OPN1MW3P0DN78 364 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 RPL30P62888 115 aaKnown RBP11.13□□□□□ -0.63
ACTN1-202ENST00000376839 TNFRSF9Q07011 255 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-202ENST00000376839 GATAD1Q8WUU5 269 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 RPUSD4Q96CM3 377 aaKnown RBP11.13□□□□□ -0.63
ACTN1-202ENST00000376839 SPRY4Q9C004 299 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 CLN8Q9UBY8 286 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 NXPH2O95156 264 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 KRASP01116 189 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 IFNA1P01562 189 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 ACP1P24666 158 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 G6PCP35575 357 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 GPX4P36969 197 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-202ENST00000376839 MEF2BQ02080 365 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-202ENST00000376839 NCR3LG1Q68D85 454 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 C16orf82Q7Z2V1 217 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 ZNF808Q8N4W9 903 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-202ENST00000376839 OR1L1Q8NH94 360 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 WDYHV1Q96HA8 205 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 PARD6GQ9BYG4 376 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-202ENST00000376839 OR2J1Q9GZK6 312 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 CDH20Q9HBT6 801 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 A0A1W2PNU3 283 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-202ENST00000376839 CACNA1DQ01668 2161 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 ZNF816Q0VGE8 651 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-202ENST00000376839 OR4X1Q8NH49 305 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 HIST1H2BLQ99880 126 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 NAT8Q9UHE5 227 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 WIPI2Q9Y4P8 454 aa11.13□□□□□ -0.63
ACTN1-202ENST00000376839 PSPNO60542 156 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 UBALD2Q8IYN6 164 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 CTDSP1Q9GZU7 261 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 OR2D2Q9H210 308 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 GFOD1Q9NXC2 390 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 NBEAQ8NFP9 2946 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 LAMTOR5O43504 91 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 DEFA4P12838 97 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 MEOX1P50221 254 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 RTP5Q14D33 572 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 DCAF10Q5QP82 559 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 CYP2G1PQ6ZSU1 146 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 OR10A7Q8NGE5 316 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 S100PBPQ96BU1 408 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 PACRGQ96M98 296 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-202ENST00000376839 IER2Q9BTL4 223 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 HSPB7Q9UBY9 170 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 GAB2Q9UQC2 676 aa11.12□□□□□ -0.63
ACTN1-202ENST00000376839 FAM90A26D6RGX4 464 aa11.11□□□□□ -0.63
ACTN1-202ENST00000376839 SMPD2O60906 423 aa11.11□□□□□ -0.63
ACTN1-202ENST00000376839 KBTBD11O94819 623 aa11.11□□□□□ -0.63
ACTN1-202ENST00000376839 TFF1P04155 84 aa11.11□□□□□ -0.63
ACTN1-202ENST00000376839 GRPP07492 148 aa11.11□□□□□ -0.63
ACTN1-202ENST00000376839 PFN1P07737 140 aaKnown RBP11.11□□□□□ -0.63
ACTN1-202ENST00000376839 OR3A1P47881 315 aa11.11□□□□□ -0.63
ACTN1-202ENST00000376839 DEFA6Q01524 100 aa11.11□□□□□ -0.63
ACTN1-202ENST00000376839 TFF3Q07654 80 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms