RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 OR4F4Q96R69 305 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 NEU1Q99519 415 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 B4E171 279 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 FAM90A26D6RGX4 464 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 TCAPO15273 167 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 TRAPPC6AO75865 159 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 PLA2G5P39877 138 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 TSPAN7P41732 249 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 NUTF2P61970 127 aaKnown RBP17.9■□□□□ 0.46
UPF3A-202ENST00000375299 OR2T10Q8NGZ9 312 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 MANBALQ9NQG1 85 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 KCNS2Q9ULS6 477 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 A0A096LPE4 126 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 A0A1W2PPZ6 126 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 GYPAP02724 150 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 TYMSP04818 313 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 IL11RAQ14626 422 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 C9orf135Q5VTT2 229 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 FAM58AQ8N1B3 248 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 OR6C3Q9NZP0 311 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 RBM7Q9Y580 266 aaKnown RBP17.89■□□□□ 0.45
UPF3A-202ENST00000375299 EREGO14944 169 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 SS18L1O75177 396 aaPredicted RBP17.89■□□□□ 0.45
UPF3A-202ENST00000375299 SRP14P37108 136 aaKnown RBP17.89■□□□□ 0.45
UPF3A-202ENST00000375299 HNF4GQ14541 408 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 CISD2Q8N5K1 135 aaKnown RBP17.89■□□□□ 0.45
UPF3A-202ENST00000375299 GATAD1Q8WUU5 269 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 OR5P3Q8WZ94 311 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 PRRG4Q9BZD6 226 aa17.89■□□□□ 0.45
UPF3A-202ENST00000375299 MRPL33O75394 65 aaKnown RBP17.88■□□□□ 0.45
UPF3A-202ENST00000375299 CLDN1O95832 211 aa17.88■□□□□ 0.45
UPF3A-202ENST00000375299 CCKARP32238 428 aa17.88■□□□□ 0.45
UPF3A-202ENST00000375299 MRPL37Q9BZE1 423 aaKnown RBP17.88■□□□□ 0.45
UPF3A-202ENST00000375299 WASF3Q9UPY6 502 aa17.88■□□□□ 0.45
UPF3A-202ENST00000375299 C3orf80F5H4A9 247 aa17.88■□□□□ 0.45
UPF3A-202ENST00000375299 COX5BP10606 129 aa17.88■□□□□ 0.45
UPF3A-202ENST00000375299 SPINK2P20155 84 aa17.88■□□□□ 0.45
UPF3A-202ENST00000375299 MRPL41Q8IXM3 137 aaKnown RBP17.88■□□□□ 0.45
UPF3A-202ENST00000375299 OR2Y1Q8NGV0 311 aa17.88■□□□□ 0.45
UPF3A-202ENST00000375299 IFI44Q8TCB0 444 aa17.88■□□□□ 0.45
UPF3A-202ENST00000375299 SIT1Q9Y3P8 196 aa17.88■□□□□ 0.45
UPF3A-202ENST00000375299 TRAV39A0A0B4J263 110 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 MBP02144 154 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 IQCJQ1A5X6 159 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 ZNF573Q86YE8 665 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 PRR18Q8N4B5 295 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 OR10G9Q8NGN4 311 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 OR10G7Q8NGN6 311 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 LINC00470Q9BZP3 86 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 NGFP01138 241 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 OR4A8P0C604 315 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 TNFRSF9Q07011 255 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 MOB1BQ7L9L4 216 aa17.87■□□□□ 0.45
UPF3A-202ENST00000375299 WDR1O75083 606 aa17.86■□□□□ 0.45
UPF3A-202ENST00000375299 VENTXO95231 258 aa17.86■□□□□ 0.45
UPF3A-202ENST00000375299 PAX5Q02548 391 aa17.86■□□□□ 0.45
UPF3A-202ENST00000375299 ATP6V1FQ16864 119 aa17.86■□□□□ 0.45
UPF3A-202ENST00000375299 FGFRL1Q8N441 504 aa17.86■□□□□ 0.45
UPF3A-202ENST00000375299 TMEM147Q9BVK8 224 aa17.86■□□□□ 0.45
UPF3A-202ENST00000375299 PILRBQ9UKJ0 227 aa17.86■□□□□ 0.45
UPF3A-202ENST00000375299 ZNF503-AS2A6NEH8 195 aa17.86■□□□□ 0.45
UPF3A-202ENST00000375299 GNB2P62879 340 aa17.86■□□□□ 0.45
UPF3A-202ENST00000375299 KCNIP4Q6PIL6 250 aa17.86■□□□□ 0.45
UPF3A-202ENST00000375299 HLA-CQ95604 372 aa17.86■□□□□ 0.45
UPF3A-202ENST00000375299 NEIL1Q96FI4 390 aaPredicted RBP17.86■□□□□ 0.45
UPF3A-202ENST00000375299 OR5B21A6NL26 309 aa17.85■□□□□ 0.45
UPF3A-202ENST00000375299 ANKRD30BLA7E2S9 258 aa17.85■□□□□ 0.45
UPF3A-202ENST00000375299 CNN1P51911 297 aaKnown RBP17.85■□□□□ 0.45
UPF3A-202ENST00000375299 GNG3P63215 75 aa17.85■□□□□ 0.45
UPF3A-202ENST00000375299 Q6P435 159 aa17.85■□□□□ 0.45
UPF3A-202ENST00000375299 GBGT1Q8N5D6 347 aa17.85■□□□□ 0.45
UPF3A-202ENST00000375299 FRYLO94915 3013 aa17.85■□□□□ 0.45
UPF3A-202ENST00000375299 GDF1P27539 372 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 PRSS8Q16651 343 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 FFAR4Q5NUL3 377 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 DRAM1Q8N682 238 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 HSPB7Q9UBY9 170 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 MPC1Q9Y5U8 109 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 VPS13AQ96RL7 3174 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 PAGE4O60829 102 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 LILRA1O75019 489 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 PMS2CLQ68D20 193 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 MYPOPQ86VE0 399 aaPredicted RBP17.84■□□□□ 0.45
UPF3A-202ENST00000375299 UBALD1Q8TB05 177 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 PKIBQ9C010 78 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 ESPL1Q14674 2120 aa17.84■□□□□ 0.45
UPF3A-202ENST00000375299 IGKV3D-15A0A087WSY6 115 aa17.83■□□□□ 0.45
UPF3A-202ENST00000375299 RHBDL1O75783 438 aa17.83■□□□□ 0.45
UPF3A-202ENST00000375299 CCL4P13236 92 aa17.83■□□□□ 0.45
UPF3A-202ENST00000375299 COX5AP20674 150 aa17.83■□□□□ 0.45
UPF3A-202ENST00000375299 FOLR3P41439 243 aa17.83■□□□□ 0.45
UPF3A-202ENST00000375299 FOXG1P55316 489 aaPredicted RBP17.83■□□□□ 0.45
UPF3A-202ENST00000375299 GFRA1P56159 465 aa17.83■□□□□ 0.45
UPF3A-202ENST00000375299 LCN2P80188 198 aa17.83■□□□□ 0.45
UPF3A-202ENST00000375299 DEPPQ9NTK1 212 aa17.83■□□□□ 0.45
UPF3A-202ENST00000375299 TRAPPC2LQ9UL33 140 aa17.83■□□□□ 0.45
UPF3A-202ENST00000375299 RNF212BA8MTL3 300 aa17.83■□□□□ 0.44
UPF3A-202ENST00000375299 MRPS18CQ9Y3D5 142 aaKnown RBP17.83■□□□□ 0.44
UPF3A-202ENST00000375299 FREM1Q5H8C1 2179 aa17.83■□□□□ 0.44
UPF3A-202ENST00000375299 ZNF497Q6ZNH5 498 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms