RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 SDHAF2Q9NX18 166 aa12.91□□□□□ -0.34
NIPAL3-204ENST00000374399 RPUSD1Q9UJJ7 312 aaKnown RBP12.91□□□□□ -0.34
NIPAL3-204ENST00000374399 RBM7Q9Y580 266 aaKnown RBP12.91□□□□□ -0.34
NIPAL3-204ENST00000374399 USP9YO00507 2555 aaPredicted RBP12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 ARID1AO14497 2285 aa12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 ARHGAP32A7KAX9 2087 aa12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 ITGB1BP1O14713 200 aa12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 RGS11O94810 467 aa12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 BRWD1-AS2P59051 145 aa12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 LINC00205P59089 165 aa12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 GGNBP1Q5YKI7 109 aa12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 SELENOHQ8IZQ5 122 aaKnown RBP12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 OR52M1Q8NGK5 317 aa12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 OR51H1Q8NH63 302 aa12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 RAB1CQ92928 201 aa12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 ZNF714Q96N38 554 aa12.9□□□□□ -0.34
NIPAL3-204ENST00000374399 VPS13CQ709C8 3753 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 CELSR2Q9HCU4 2923 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 C13orf42A0A1B0GVH6 325 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 A0A1W2PPE3 182 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 F5H0A9 414 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 IGKV1-39P01597 117 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 IGHV4-39P01824 125 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 IGKV1D-39P04432 117 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 PLA2G2AP14555 144 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 ZNF585BQ52M93 769 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 WDR25Q64LD2 544 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 GSG1LQ6UXU4 331 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 HEPN1Q6WQI6 88 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 LGI3Q8N145 548 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 SLC35G3Q8N808 338 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 ZBTB34Q8NCN2 500 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 PPP1R1CQ8WVI7 109 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 EDARADDQ8WWZ3 215 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 NMES1Q9C002 83 aa12.89□□□□□ -0.35
NIPAL3-204ENST00000374399 C5orf51A6NDU8 294 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 TMEM268Q5VZI3 342 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 FAM219AQ8IW50 185 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 ODF3L1Q8IXM7 274 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 OR10A7Q8NGE5 316 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 FAM216AQ8WUB2 273 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 NEIL1Q96FI4 390 aaPredicted RBP12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 TIMD4Q96H15 378 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 METTL8Q9H825 291 aaKnown RBP12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 RAB9BQ9NP90 201 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 LPAR3Q9UBY5 353 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 MIOXQ9UGB7 285 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 SPG11Q96JI7 2443 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 TRBV23-1A0A0A0MS06 115 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 LINC00473A8K010 186 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 NFYBP25208 207 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 TMEM30BQ3MIR4 351 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 LGALSLQ3ZCW2 172 aaPredicted RBP12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 BTNL3Q6UXE8 466 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 ZNF525Q8N782 197 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 C8orf46Q8TAG6 207 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 C2orf50Q96LR7 162 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 ZNF251Q9BRH9 671 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 PDCD10Q9BUL8 212 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 GAL3ST2Q9H3Q3 398 aa12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 PATZ1Q9HBE1 687 aaKnown RBP12.88□□□□□ -0.35
NIPAL3-204ENST00000374399 OR8B3Q8NGG8 313 aa12.87□□□□□ -0.35
NIPAL3-204ENST00000374399 OR8B2Q96RD0 313 aa12.87□□□□□ -0.35
NIPAL3-204ENST00000374399 ABHD14AQ9BUJ0 271 aa12.87□□□□□ -0.35
NIPAL3-204ENST00000374399 ZNRD1Q9P1U0 126 aa12.87□□□□□ -0.35
NIPAL3-204ENST00000374399 GAB2Q9UQC2 676 aa12.87□□□□□ -0.35
NIPAL3-204ENST00000374399 C17orf98A8MV24 154 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 C22orf46C9J442 243 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 H0YIZ8 118 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 MPC2O95563 127 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 COX6B1P14854 86 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 COL8A1P27658 744 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 GPR6P46095 362 aaPredicted RBP12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 SRPXP78539 464 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 Q3ZCU0 254 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 RPL39P5Q59GN2 51 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 NMSQ5H8A3 153 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 SLC25A48Q6ZT89 311 aaKnown RBP12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 LY6G5BQ8NDX9 201 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 NRGNQ92686 78 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 IL22RA2Q969J5 263 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 CCL19Q99731 98 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 RNF126Q9BV68 326 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 NARFLQ9H6Q4 476 aa12.86□□□□□ -0.35
NIPAL3-204ENST00000374399 A0A0G2JRQ6 117 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 GPR37O15354 613 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 RAMP3O60896 148 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 B3GALNT1O75752 331 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 CXCL2P19875 107 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 S100GP29377 79 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 IFITM2Q01629 132 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 IAH1Q2TAA2 248 aaPredicted RBP12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 LRRC37A5PQ49AS3 106 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 RBPMSQ93062 196 aaKnown RBP12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 TMED3Q9Y3Q3 217 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 A0A087X0M5 115 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 A0A1B0GX30 115 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 HMSDA8MTL9 139 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 SLC25A4P12235 298 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 DUTP33316 252 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms