RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 SPINT2O43291 252 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 C1QTNF9P0C862 333 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 CD80P33681 288 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 WFDC8Q8IUA0 241 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 ZNRF1Q8ND25 227 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 OR2D2Q9H210 308 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 ZNF665Q9H7R5 613 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 IGHV3OR15-7A0A075B7D8 119 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 PPP1CCP36873 323 aaKnown RBP10.39□□□□□ -0.75
PRPF4-202ENST00000374199 ZNF134P52741 427 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 BTNL8Q6UX41 500 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 TGIF2LYQ8IUE0 185 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 CCDC28AQ8IWP9 274 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 LINC00473A8K010 186 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 IL6RP08887 468 aaPredicted RBP10.39□□□□□ -0.75
PRPF4-202ENST00000374199 IL2RGP31785 369 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 DUTP33316 252 aaKnown RBP10.39□□□□□ -0.75
PRPF4-202ENST00000374199 MEF2CQ06413 473 aaPredicted RBP10.39□□□□□ -0.75
PRPF4-202ENST00000374199 TMEM252Q8N6L7 170 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 OR51H1Q8NH63 302 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 EDARADDQ8WWZ3 215 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 ARL11Q969Q4 196 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 RAB40CQ96S21 281 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 DCTN5Q9BTE1 182 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 SCRT1Q9BWW7 348 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 PARP11Q9NR21 331 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 GFOD1Q9NXC2 390 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 TAS2R3Q9NYW6 316 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 CALYQ9NYX4 217 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 ZNF729A6NN14 1252 aaPredicted RBP10.39□□□□□ -0.75
PRPF4-202ENST00000374199 KRBOX1C9JBD0 128 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 PPIHO43447 177 aaKnown RBP10.39□□□□□ -0.75
PRPF4-202ENST00000374199 RAMP3O60896 148 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 SCO1O75880 301 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 POLR2GP62487 172 aaKnown RBP eCLIP10.39□□□□□ -0.75
PRPF4-202ENST00000374199 RAB9BQ9NP90 201 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 COQ3Q9NZJ6 369 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 PPP1R3CQ9UQK1 317 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 ZGRF1Q86YA3 2104 aa10.39□□□□□ -0.75
PRPF4-202ENST00000374199 A0A1B0GW55 424 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 LGALS8O00214 317 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 CLDN14O95500 239 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 CYB5R3P00387 301 aaPredicted RBP10.38□□□□□ -0.75
PRPF4-202ENST00000374199 DANCRP0C864 163 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 DUX4L2P0CJ85 424 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 DUX4L3P0CJ86 424 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 DUX4L4P0CJ87 422 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 DUX4L5P0CJ88 424 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 DUX4L6P0CJ89 424 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 DUX4L7P0CJ90 424 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 CDSNQ15517 529 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 ADAM5Q6NVV9 412 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 DUX4L9Q6RFH8 374 aaPredicted RBP10.38□□□□□ -0.75
PRPF4-202ENST00000374199 VHLLQ6RSH7 139 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 IL34Q6ZMJ4 242 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 C1orf229Q6ZS94 237 aaPredicted RBP10.38□□□□□ -0.75
PRPF4-202ENST00000374199 PUSL1Q8N0Z8 303 aaKnown RBP10.38□□□□□ -0.75
PRPF4-202ENST00000374199 FGFRL1Q8N441 504 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 DUX4Q9UBX2 424 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 PFDN2Q9UHV9 154 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 ADGRG4Q8IZF6 3080 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 A0A087X0M5 115 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 A0A1B0GX30 115 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 TMEM8BA6NDV4 472 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 DEFB108AA8MXU0 73 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 FAM157AC9JC47 383 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 TOR1AO14656 332 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 SERPINE2P07093 398 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 APOBEC3AP31941 199 aaPredicted RBP10.38□□□□□ -0.75
PRPF4-202ENST00000374199 DLX6P56179 175 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 TPRX1Q8N7U7 411 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 MMP26Q9NRE1 261 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 LINC00312Q9Y6C7 94 aa10.38□□□□□ -0.75
PRPF4-202ENST00000374199 B9A039 149 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 RAB29O14966 203 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 UNQ6494/PRO21346Q6UXR6 183 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 NARFLQ9H6Q4 476 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 OR2S2Q9NQN1 319 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 LAMP3Q9UQV4 416 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 ATXN7O15265 892 aaPredicted RBP10.37□□□□□ -0.75
PRPF4-202ENST00000374199 HSPA12AO43301 675 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 ZG16O60844 167 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 CASP6P55212 293 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 NHLH2Q02577 135 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 EIF5AL1Q6IS14 154 aaKnown RBP10.37□□□□□ -0.75
PRPF4-202ENST00000374199 PRR18Q8N4B5 295 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 CD300LFQ8TDQ1 290 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 TMED6Q8WW62 240 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 SLC25A31Q9H0C2 315 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 DCAF16Q9NXF7 216 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 C17orf98A8MV24 154 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 OR8U8P0C7N1 319 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 MDKP21741 143 aaPredicted RBP10.37□□□□□ -0.75
PRPF4-202ENST00000374199 PPOXP50336 477 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 POU2AF1Q16633 256 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 ZNF672Q499Z4 452 aaPredicted RBP10.37□□□□□ -0.75
PRPF4-202ENST00000374199 FAM201AQ5SY85 155 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 PLPPR2Q96GM1 343 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 LINC00052Q96N35 136 aa10.37□□□□□ -0.75
PRPF4-202ENST00000374199 CHST1O43916 411 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms