RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ZC2HC1AQ96GY0 325 aa8.15□□□□□ -1.11
SF3A3-201ENST00000373019 LIN37Q96GY3 246 aaPredicted RBP8.15□□□□□ -1.11
SF3A3-201ENST00000373019 KCNK17Q96T54 332 aa8.15□□□□□ -1.11
SF3A3-201ENST00000373019 SPIN2AQ99865 258 aa8.15□□□□□ -1.11
SF3A3-201ENST00000373019 SPIN2BQ9BPZ2 258 aa8.15□□□□□ -1.11
SF3A3-201ENST00000373019 A0A0G2JRQ6 117 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 C22orf46C9J442 243 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 KITLGP21583 273 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 RNPS1Q15287 305 aaKnown RBP8.14□□□□□ -1.11
SF3A3-201ENST00000373019 TCEA2Q15560 299 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 ST6GALNAC3Q8NDV1 305 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 ASB10Q8WXI3 467 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 SFRP2Q96HF1 295 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 TDRD6O60522 2096 aaKnown RBP8.14□□□□□ -1.11
SF3A3-201ENST00000373019 EML2O95834 649 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 MT-ATP6P00846 226 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 IGHG1P01857 330 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 IGLL1P15814 213 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 ZNF121P58317 390 aaPredicted RBP8.14□□□□□ -1.11
SF3A3-201ENST00000373019 LCN12Q6JVE5 192 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 CCDC71LQ8N9Z2 235 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 SOHLH2Q9NX45 425 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 WNT16Q9UBV4 365 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 MYO15AQ9UKN7 3530 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 TRBV20OR9-2A0A075B6H5 130 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 LOC102725191A0A1B0GVB3 256 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 H0YGG7 62 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 H0YIG0 161 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 PAGE4O60829 102 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 ZNF10P21506 573 aaPredicted RBP8.14□□□□□ -1.11
SF3A3-201ENST00000373019 AMTP48728 403 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 ARF3P61204 181 aaPredicted RBP8.14□□□□□ -1.11
SF3A3-201ENST00000373019 IGFBP7Q16270 282 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 DEFB125Q8N687 156 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 WDR61Q9GZS3 305 aaKnown RBP8.14□□□□□ -1.11
SF3A3-201ENST00000373019 RARRES3Q9UL19 164 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 POLR1DQ9Y2S0 133 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 UBE2J1Q9Y385 318 aaPredicted RBP8.14□□□□□ -1.11
SF3A3-201ENST00000373019 SPACA6W5XKT8 324 aa8.14□□□□□ -1.11
SF3A3-201ENST00000373019 SAA2-SAA4A0A096LPE2 208 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 MS4A18H0YCH9 400 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 RAMP3O60896 148 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 CLPSP04118 112 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 CELA3BP08861 270 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 CTSEP14091 401 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 PGCP20142 388 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 VDAC1P21796 283 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 GNB1P62873 340 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 PSG9Q00887 426 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 PAX2Q02962 417 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 ZNF77Q15935 545 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 MS4A18Q3C1V0 323 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 NEIL1Q96FI4 390 aaPredicted RBP8.13□□□□□ -1.11
SF3A3-201ENST00000373019 GMPPAQ96IJ6 420 aaPredicted RBP8.13□□□□□ -1.11
SF3A3-201ENST00000373019 PLA2G2FQ9BZM2 168 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 STARD5Q9NSY2 213 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 RALGAPA1Q6GYQ0 2036 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 TRAV8-6A0A0B4J262 113 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 NAPSAO96009 420 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 PPYP01298 95 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 ACSM6Q6P461 480 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 OR10V1Q8NGI7 309 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 TMEM186Q96B77 213 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 LYZL4Q96KX0 146 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 CLEC7AQ9BXN2 247 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 SLC25A22Q9H936 323 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 TNFSF14O43557 240 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 FCGR2AP12318 317 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 P2RY2P41231 377 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 RELBQ01201 579 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 OR10G8Q8NGN5 311 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 KCNS1Q96KK3 526 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 HDAC8Q9BY41 377 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 MMP17Q9ULZ9 603 aa8.13□□□□□ -1.11
SF3A3-201ENST00000373019 NCOR2Q9Y618 2525 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 CA2P00918 260 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 REG1AP05451 166 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 ZXDAP98168 799 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 PRTGQ2VWP7 1150 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 ZNF818PQ6ZRF7 136 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 VASH2Q86V25 355 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 FER1L6-AS1Q8NA97 138 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 SGCZQ96LD1 299 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 MED29Q9NX70 200 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 SIT1Q9Y3P8 196 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 PPIAL4EA0A075B759 164 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 PPIAL4CA0A0B4J2A2 164 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 PPIAL4DF5H284 164 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 H0YJW9 148 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 FCN1O00602 326 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 HCRTR1O43613 425 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 IGLC1P0CG04 106 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 PPIAL4FP0DN26 164 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 PMCHP20382 165 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 OR1D5P58170 312 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 FAM19A2Q8N3H0 131 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 OR4C12Q96R67 309 aa8.12□□□□□ -1.11
SF3A3-201ENST00000373019 M0R296 226 aa8.11□□□□□ -1.11
SF3A3-201ENST00000373019 ZNF324O75467 553 aaPredicted RBP8.11□□□□□ -1.11
SF3A3-201ENST00000373019 UTS2O95399 124 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms